From 316f1360d1e12eefe491f86b0bbcd6dcf091c736 Mon Sep 17 00:00:00 2001
From: Johannes Ranke <jranke@uni-bremen.de>
Date: Sat, 12 Jul 2014 08:32:08 +0200
Subject: First working fits with IORE model

---
 man/FOMC.solution.Rd |  2 +-
 man/IORE.solution.Rd | 34 ++++++++++++++++++++++++++++++++++
 man/mkinmod.Rd       |  5 +++--
 3 files changed, 38 insertions(+), 3 deletions(-)
 create mode 100644 man/IORE.solution.Rd

(limited to 'man')

diff --git a/man/FOMC.solution.Rd b/man/FOMC.solution.Rd
index d04d34e1..f4a26e41 100644
--- a/man/FOMC.solution.Rd
+++ b/man/FOMC.solution.Rd
@@ -44,6 +44,6 @@ FOMC.solution(t, parent.0, alpha, beta)
   Technology} \bold{24}, 1032-1038
 }
 \examples{
-  \dontrun{plot(function(x) FOMC.solution(x, 100, 10, 2), 0, 2)}
+  \dontrun{plot(function(x) FOMC.solution(x, 100, 10, 2), 0, 2, ylim = c(0, 100))}
 }
 \keyword{ manip }
diff --git a/man/IORE.solution.Rd b/man/IORE.solution.Rd
new file mode 100644
index 00000000..65dac9a7
--- /dev/null
+++ b/man/IORE.solution.Rd
@@ -0,0 +1,34 @@
+\name{IORE.solution}
+\Rdversion{1.1}
+\alias{IORE.solution}
+\title{ Indeterminate order rate equation kinetics }
+\description{
+  Function describing exponential decline from a defined starting value, with 
+  a concentration dependent rate constant.
+}
+\usage{
+  IORE.solution(t, parent.0, k.iore, N)
+}
+\arguments{
+  \item{t}{ Time. }
+  \item{parent.0}{ Starting value for the response variable at time zero. }
+  \item{k.iore}{ Rate constant. Note that this depends on the concentration units used. }
+  \item{N}{ Exponent describing the nonlinearity of the rate equation } 
+}
+\note{
+  The solution of the IORE kinetic model reduces to the
+  \code{\link{SFO.solution}} if N = 1.
+}
+\value{
+  The value of the response variable at time \code{t}.
+}
+\references{
+  NAFTA Technical Working Group on Pesticides (not dated) Guidance for
+  Evaluating and Calculating Degradation Kinetics in Environmental 
+  Media
+}
+\examples{
+  \dontrun{plot(function(x) IORE.solution(x, 100, 0.2, 1.3), 0, 2, 
+	                                  ylim = c(0, 100))}
+}
+\keyword{ manip }
diff --git a/man/mkinmod.Rd b/man/mkinmod.Rd
index 76127c58..63087d49 100644
--- a/man/mkinmod.Rd
+++ b/man/mkinmod.Rd
@@ -18,7 +18,7 @@ mkinmod(..., use_of_ff = "min", speclist = NULL)
     for the variable. Currently, single first order kinetics "SFO" or
     single first order with reversible binding "SFORB" are implemented for all
     variables, while 
-    "FOMC", "DFOP" and "HS" can additionally be chosen for the first
+    "FOMC", "IORE", "DFOP" and "HS" can additionally be chosen for the first
     variable which is assumed to be the source compartment.
     Additionally, each component of the list can include a character vector \code{to},
     specifying names of variables to which a transfer is to be assumed in the
@@ -46,7 +46,8 @@ mkinmod(..., use_of_ff = "min", speclist = NULL)
     \item{map}{ A list containing named character vectors for each observed variable, specifying
       the modelling variables by which it is represented. }
     \item{use_of_ff}{ The content of \code{use_of_ff} is passed on in this list component. }
-    \item{coefmat}{ The coefficient matrix, if the system of differential equations can be represented by one. }
+    \item{coefmat}{ The coefficient matrix, if the system of differential equations can be
+      represented by one. }
 }
 \author{
   Johannes Ranke
-- 
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