From 4e37669ac2ad3b3138480c3209f414101469fac7 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Mon, 11 Jan 2021 12:59:50 +0100 Subject: Rebuild docs --- man/mccall81_245T.Rd | 2 +- man/mkinfit.Rd | 2 +- man/saem.Rd | 8 ++++---- man/summary.saem.mmkin.Rd | 2 +- 4 files changed, 7 insertions(+), 7 deletions(-) (limited to 'man') diff --git a/man/mccall81_245T.Rd b/man/mccall81_245T.Rd index 44a0c2cf..e7eaed94 100644 --- a/man/mccall81_245T.Rd +++ b/man/mccall81_245T.Rd @@ -25,7 +25,7 @@ } \source{ McCall P, Vrona SA, Kelley SS (1981) Fate of uniformly carbon-14 ring labelled 2,4,5-Trichlorophenoxyacetic acid and 2,4-dichlorophenoxyacetic acid. J Agric Chem 29, 100-107 - \url{http://dx.doi.org/10.1021/jf00103a026} + \doi{10.1021/jf00103a026} } \examples{ SFO_SFO_SFO <- mkinmod(T245 = list(type = "SFO", to = "phenol"), diff --git a/man/mkinfit.Rd b/man/mkinfit.Rd index 768b85d3..b5b24449 100644 --- a/man/mkinfit.Rd +++ b/man/mkinfit.Rd @@ -286,7 +286,7 @@ for measurement error in analytical chemistry. \emph{Technometrics} 37(2), 176-1 Ranke J and Meinecke S (2019) Error Models for the Kinetic Evaluation of Chemical Degradation Data. \emph{Environments} 6(12) 124 -\href{https://doi.org/10.3390/environments6120124}{doi:10.3390/environments6120124}. +\doi{10.3390/environments6120124}. } \seealso{ \link{summary.mkinfit}, \link{plot.mkinfit}, \link{parms} and \link{lrtest}. diff --git a/man/saem.Rd b/man/saem.Rd index 969e9a22..775a8e7b 100644 --- a/man/saem.Rd +++ b/man/saem.Rd @@ -57,7 +57,7 @@ automatic choice is not desired} \item{control}{Passed to \link[saemix:saemix]{saemix::saemix}} \item{verbose}{Should we print information about created objects of -type \link[saemix:SaemixModel]{saemix::SaemixModel} and \link[saemix:SaemixData]{saemix::SaemixData}?} +type \link[saemix:SaemixModel-class]{saemix::SaemixModel} and \link[saemix:SaemixData-class]{saemix::SaemixData}?} \item{suppressPlot}{Should we suppress any plotting that is done by the saemix function?} @@ -71,12 +71,12 @@ and the end of the optimisation process?} } \value{ An S3 object of class 'saem.mmkin', containing the fitted -\link[saemix:SaemixObject]{saemix::SaemixObject} as a list component named 'so'. The +\link[saemix:SaemixObject-class]{saemix::SaemixObject} as a list component named 'so'. The object also inherits from 'mixed.mmkin'. -An \link[saemix:SaemixModel]{saemix::SaemixModel} object. +An \link[saemix:SaemixModel-class]{saemix::SaemixModel} object. -An \link[saemix:SaemixData]{saemix::SaemixData} object. +An \link[saemix:SaemixData-class]{saemix::SaemixData} object. } \description{ This function uses \code{\link[saemix:saemix]{saemix::saemix()}} as a backend for fitting nonlinear mixed diff --git a/man/summary.saem.mmkin.Rd b/man/summary.saem.mmkin.Rd index 4f83489c..67cb3cbb 100644 --- a/man/summary.saem.mmkin.Rd +++ b/man/summary.saem.mmkin.Rd @@ -27,7 +27,7 @@ included.} \item{digits}{Number of digits to use for printing} } \value{ -The summary function returns a list based on the \link[saemix:SaemixObject]{saemix::SaemixObject} +The summary function returns a list based on the \link[saemix:SaemixObject-class]{saemix::SaemixObject} obtained in the fit, with at least the following additional components \item{saemixversion, mkinversion, Rversion}{The saemix, mkin and R versions used} \item{date.fit, date.summary}{The dates where the fit and the summary were -- cgit v1.2.1