From e7e8105390ebf3d6f034811bc7cce1d9640b7357 Mon Sep 17 00:00:00 2001
From: Johannes Ranke <jranke@uni-bremen.de>
Date: Wed, 5 Oct 2022 08:10:43 +0200
Subject: Simplify the removal of random effects

This is achieved by introducing the argument 'no_random_effect' to the
saem function.
---
 man/saem.Rd | 12 ++++++++++++
 1 file changed, 12 insertions(+)

(limited to 'man')

diff --git a/man/saem.Rd b/man/saem.Rd
index dd787475..a9c4a1bb 100644
--- a/man/saem.Rd
+++ b/man/saem.Rd
@@ -18,6 +18,8 @@ saem(object, ...)
   test_log_parms = TRUE,
   conf.level = 0.6,
   solution_type = "auto",
+  covariance.model = "auto",
+  no_random_effect = NULL,
   nbiter.saemix = c(300, 100),
   control = list(displayProgress = FALSE, print = FALSE, nbiter.saemix = nbiter.saemix,
     save = FALSE, save.graphs = FALSE),
@@ -34,6 +36,8 @@ saemix_model(
   solution_type = "auto",
   transformations = c("mkin", "saemix"),
   degparms_start = numeric(),
+  covariance.model = "auto",
+  no_random_effect = NULL,
   test_log_parms = FALSE,
   conf.level = 0.6,
   verbose = FALSE,
@@ -70,6 +74,14 @@ for parameter that are tested if requested by 'test_log_parms'.}
 \item{solution_type}{Possibility to specify the solution type in case the
 automatic choice is not desired}
 
+\item{covariance.model}{Will be passed to \code{\link[saemix:SaemixModel-class]{saemix::SaemixModel()}}. Per
+default, uncorrelated random effects are specified for all degradation
+parameters.}
+
+\item{no_random_effect}{Character vector of degradation parameters for
+which there should be no variability over the groups. Only used
+if the covariance model is not explicitly specified.}
+
 \item{nbiter.saemix}{Convenience option to increase the number of
 iterations}
 
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