From bbed90f6a4010ac0b911ec13c04ae06eebc74bb5 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Thu, 17 Aug 2023 09:23:27 +0200 Subject: Update tests without any openblas variant This even a bit faster. --- .../_snaps/multistart/llhist-for-dfop-sfo-fit.svg | 43 +- ...t-for-saem-object-with-mkin-transformations.svg | 1086 ++++++++++---------- .../_snaps/multistart/parplot-for-dfop-sfo-fit.svg | 166 +-- .../plot/mixed-model-fit-for-nlme-object.svg | 20 +- tests/testthat/print_dfop_saem_1.txt | 10 +- 5 files changed, 662 insertions(+), 663 deletions(-) (limited to 'tests') diff --git a/tests/testthat/_snaps/multistart/llhist-for-dfop-sfo-fit.svg b/tests/testthat/_snaps/multistart/llhist-for-dfop-sfo-fit.svg index 6015aed8..3b9d51fb 100644 --- a/tests/testthat/_snaps/multistart/llhist-for-dfop-sfo-fit.svg +++ b/tests/testthat/_snaps/multistart/llhist-for-dfop-sfo-fit.svg @@ -21,28 +21,26 @@ Frequency of log likelihoods - - - - + + + + + --1149.5 --1149.4 --1149.3 --1149.2 --1149.1 --1149.0 +-1149.30 +-1149.25 +-1149.20 +-1149.15 +-1149.10 +-1149.05 +-1149.00 - - 0 -1 -2 -3 -4 +1 +2 @@ -50,12 +48,13 @@ - - - - - - + + + + + + + original fit diff --git a/tests/testthat/_snaps/multistart/mixed-model-fit-for-saem-object-with-mkin-transformations.svg b/tests/testthat/_snaps/multistart/mixed-model-fit-for-saem-object-with-mkin-transformations.svg index 69fa6a4d..5e534dd1 100644 --- a/tests/testthat/_snaps/multistart/mixed-model-fit-for-saem-object-with-mkin-transformations.svg +++ b/tests/testthat/_snaps/multistart/mixed-model-fit-for-saem-object-with-mkin-transformations.svg @@ -249,7 +249,7 @@ - + @@ -342,7 +342,7 @@ - + @@ -856,38 +856,38 @@ - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + @@ -933,51 +933,51 @@ - - - + + + - - + + - - - - - - - - + + + + + + + + - - - - - - - - - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + @@ -1502,7 +1502,7 @@ - + @@ -1585,7 +1585,7 @@ - + @@ -1940,17 +1940,17 @@ - + - - - - + + + + 0 -10 -20 -30 -40 +10 +20 +30 +40 @@ -1983,290 +1983,290 @@ - - - - - - - - - - - - + + + + + + + + + + + + - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + - - - - - - - - - - - - - - + + + + + + + + + + + + + + - - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + @@ -2274,47 +2274,47 @@ - + - + - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + @@ -2323,174 +2323,174 @@ - - - - - - - - - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + - + - + - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + - - + + - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + - + - - - - - - - - - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + - - - - - - - - - - - - - - + + + + + + + + + + + + + + diff --git a/tests/testthat/_snaps/multistart/parplot-for-dfop-sfo-fit.svg b/tests/testthat/_snaps/multistart/parplot-for-dfop-sfo-fit.svg index b01dac74..ed9168fb 100644 --- a/tests/testthat/_snaps/multistart/parplot-for-dfop-sfo-fit.svg +++ b/tests/testthat/_snaps/multistart/parplot-for-dfop-sfo-fit.svg @@ -25,104 +25,104 @@ - - - + + + - + - - - - - + + + + + - - - - - - + + + + + + - - - + + + - - - - - - + + + + + + - - - - - - - - - - + + + + + + + + + + - - - - + + + + - + - - - - - + + + + + - - - - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + - + - - - - - - + + + + + + - - + + - - - - - - - - - + + + + + + + + + - - + + diff --git a/tests/testthat/_snaps/plot/mixed-model-fit-for-nlme-object.svg b/tests/testthat/_snaps/plot/mixed-model-fit-for-nlme-object.svg index 76fed0dc..c94012ce 100644 --- a/tests/testthat/_snaps/plot/mixed-model-fit-for-nlme-object.svg +++ b/tests/testthat/_snaps/plot/mixed-model-fit-for-nlme-object.svg @@ -813,7 +813,7 @@ - + @@ -833,7 +833,7 @@ - + @@ -900,7 +900,7 @@ - + @@ -921,7 +921,7 @@ - + @@ -964,8 +964,8 @@ - - + + @@ -1243,8 +1243,8 @@ - - + + @@ -1291,8 +1291,8 @@ - - + + diff --git a/tests/testthat/print_dfop_saem_1.txt b/tests/testthat/print_dfop_saem_1.txt index bdc40065..f7354320 100644 --- a/tests/testthat/print_dfop_saem_1.txt +++ b/tests/testthat/print_dfop_saem_1.txt @@ -13,11 +13,11 @@ Likelihood computed by importance sampling Fitted parameters: estimate lower upper -parent_0 99.92 98.77 101.06 -log_k1 -2.72 -2.95 -2.50 -log_k2 -4.14 -4.27 -4.01 -g_qlogis -0.35 -0.53 -0.16 -a.1 0.92 0.68 1.16 +parent_0 99.96 98.82 101.11 +log_k1 -2.71 -2.94 -2.49 +log_k2 -4.14 -4.26 -4.01 +g_qlogis -0.36 -0.54 -0.17 +a.1 0.93 0.69 1.17 b.1 0.05 0.04 0.06 SD.log_k1 0.37 0.23 0.51 SD.log_k2 0.23 0.14 0.31 -- cgit v1.2.1