From c6759635fbea7f541d421b3de78f0d8868856486 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Tue, 23 Jun 2015 11:44:00 +0200 Subject: Vignettes rebuilt by staticdocs::build_site() for static documentation on r-forge --- vignettes/FOCUS_D.html | 14 +++++++------- 1 file changed, 7 insertions(+), 7 deletions(-) (limited to 'vignettes/FOCUS_D.html') diff --git a/vignettes/FOCUS_D.html b/vignettes/FOCUS_D.html index 45c5810a..099004ad 100644 --- a/vignettes/FOCUS_D.html +++ b/vignettes/FOCUS_D.html @@ -10,7 +10,7 @@ - + Example evaluation of FOCUS Example Dataset D @@ -64,7 +64,7 @@ img { @@ -117,9 +117,9 @@ print(FOCUS_2006_D) ## 43 m1 120 25.15 ## 44 m1 120 33.31

Next we specify the degradation model: The parent compound degrades with simple first-order kinetics (SFO) to one metabolite named m1, which also degrades with SFO kinetics.

-

The call to mkinmod returns a degradation model. The differential equations represented in R code can be found in the character vector $diffs of the mkinmod object. If the gcc compiler is installed and functional, the differential equation model will be compiled from auto-generated C code.

+

The call to mkinmod returns a degradation model. The differential equations represented in R code can be found in the character vector $diffs of the mkinmod object. If a C compiler (gcc) is installed and functional, the differential equation model will be compiled from auto-generated C code.

SFO_SFO <- mkinmod(parent = mkinsub("SFO", "m1"), m1 = mkinsub("SFO"))
-
## Compiling differential equation model from auto-generated C code...
+
## Successfully compiled differential equation model from auto-generated C code.
print(SFO_SFO$diffs)
##                                                       parent 
 ## "d_parent = - k_parent_sink * parent - k_parent_m1 * parent" 
@@ -137,8 +137,8 @@ print(FOCUS_2006_D)
summary(fit)
## mkin version:    0.9.37 
 ## R version:       3.2.1 
-## Date of fit:     Mon Jun 22 23:02:24 2015 
-## Date of summary: Mon Jun 22 23:02:25 2015 
+## Date of fit:     Tue Jun 23 11:42:55 2015 
+## Date of summary: Tue Jun 23 11:42:55 2015 
 ## 
 ## Equations:
 ## d_parent = - k_parent_sink * parent - k_parent_m1 * parent
@@ -146,7 +146,7 @@ print(FOCUS_2006_D)
## ## Model predictions using solution type deSolve ## -## Fitted with method Port using 153 model solutions performed in 0.772 s +## Fitted with method Port using 153 model solutions performed in 0.719 s ## ## Weighting: none ## -- cgit v1.2.1