From 6ddb7575f37d9d534f014cbd105b2f07660d59c6 Mon Sep 17 00:00:00 2001
From: Johannes Ranke <jranke@uni-bremen.de>
Date: Thu, 2 May 2019 18:54:22 +0200
Subject: Remove reference to archived kinfit package

from vignettes/mkin.Rmd

Static documentation rebuilt by pkgdown
---
 vignettes/mkin.Rmd | 25 +++++++++++--------------
 1 file changed, 11 insertions(+), 14 deletions(-)

(limited to 'vignettes/mkin.Rmd')

diff --git a/vignettes/mkin.Rmd b/vignettes/mkin.Rmd
index 4f3ac7fc..b0d97f7e 100644
--- a/vignettes/mkin.Rmd
+++ b/vignettes/mkin.Rmd
@@ -69,17 +69,14 @@ plot_sep(f_SFO_SFO_SFO, lpos = c("topright", "bottomright", "bottomright"))
 Many approaches are possible regarding the evaluation of chemical degradation
 data.
 
-The now deprecated `kinfit` package [@pkg:kinfit] in `R` [@rcore2016]
-implements the approach recommended in the kinetics report provided by the
-FOrum for Co-ordination of pesticide fate models and their USe [@FOCUS2006;
--@FOCUSkinetics2014] for simple data series for one parent compound in one
-compartment.
-
-The `mkin` package [@pkg:mkin] extends this approach to data series with
-transformation products, commonly termed metabolites, and to more than one
-compartment. It is also possible to include back reactions, so equilibrium
-reactions and equilibrium partitioning can be specified, although this
-oftentimes leads to an overparameterisation of the model.
+The `mkin` package [@pkg:mkin] implements the approach recommended in the
+kinetics report provided by the FOrum for Co-ordination of pesticide fate
+models and their USe [@FOCUS2006; -@FOCUSkinetics2014] implements this approach
+for simple decline data series, data series with transformation products,
+commonly termed metabolites, data series for more than one compartment. It is
+also possible to include back reactions, so equilibrium reactions and
+equilibrium partitioning can be specified, although this oftentimes leads to an
+overparameterisation of the model.
 
 When the first `mkin` code was published in 2010, the most commonly used tools for
 fitting more complex kinetic degradation models to experimental data were
@@ -90,9 +87,9 @@ compartment based tool providing infrastructure for fitting dynamic simulation
 models based on differential equations to data.
 
 The code was first uploaded to the BerliOS platform. When this was taken down,
-the version control history was imported into the R-Forge site, where the code
-is still mirrored today (see *e.g.*
-[the initial commit on 11 May 2010](http://cgit.jrwb.de/mkin/commit/?id=30cbb4092f6d2d3beff5800603374a0d009ad770)).
+the version control history was imported into the R-Forge site (see *e.g.*
+[the initial commit on 11 May 2010](http://cgit.jrwb.de/mkin/commit/?id=30cbb4092f6d2d3beff5800603374a0d009ad770)),
+where the code is still occasionally updated.
 
 At that time, the R package `FME` (Flexible Modelling Environment)
 [@soetaert2010] was already available, and provided a good basis for
-- 
cgit v1.2.1

