From 9ae42bd20bc2543a94cf1581ba9820c2f9e3afbd Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Thu, 20 Apr 2023 19:53:28 +0200 Subject: Fix and rebuild documentation, see NEWS I had to fix the two pathway vignettes, as they did not work with the released version any more. So they and the multistart vignette which got some small fixes as well were rebuilt. Complete rebuild of the online docs with the released version. The documentation of the 'hierarchial_kinetics' format had to be fixed as well. --- vignettes/prebuilt/2022_cyan_pathway.pdf | Bin 662810 -> 680647 bytes vignettes/prebuilt/2022_cyan_pathway.rmd | 3 +-- vignettes/prebuilt/2022_dmta_pathway.pdf | Bin 607514 -> 607671 bytes vignettes/prebuilt/2022_dmta_pathway.rmd | 3 +-- 4 files changed, 2 insertions(+), 4 deletions(-) (limited to 'vignettes/prebuilt') diff --git a/vignettes/prebuilt/2022_cyan_pathway.pdf b/vignettes/prebuilt/2022_cyan_pathway.pdf index 9d2d22ea..ec37706f 100644 Binary files a/vignettes/prebuilt/2022_cyan_pathway.pdf and b/vignettes/prebuilt/2022_cyan_pathway.pdf differ diff --git a/vignettes/prebuilt/2022_cyan_pathway.rmd b/vignettes/prebuilt/2022_cyan_pathway.rmd index d0b2c889..8463c854 100644 --- a/vignettes/prebuilt/2022_cyan_pathway.rmd +++ b/vignettes/prebuilt/2022_cyan_pathway.rmd @@ -1,7 +1,7 @@ --- title: "Testing hierarchical pathway kinetics with residue data on cyantraniliprole" author: Johannes Ranke -date: Last change on 6 January 2023, last compiled on `r format(Sys.time(), "%e +date: Last change on 20 April 2023, last compiled on `r format(Sys.time(), "%e %B %Y")` output: pdf_document: @@ -542,7 +542,6 @@ for (deg_mod in rownames(f_saem_3)) { ## Session info ```{r, echo = FALSE, cache = FALSE} -parallel::stopCluster(cl = cl) sessionInfo() ``` diff --git a/vignettes/prebuilt/2022_dmta_pathway.pdf b/vignettes/prebuilt/2022_dmta_pathway.pdf index 56534ebf..95d0964d 100644 Binary files a/vignettes/prebuilt/2022_dmta_pathway.pdf and b/vignettes/prebuilt/2022_dmta_pathway.pdf differ diff --git a/vignettes/prebuilt/2022_dmta_pathway.rmd b/vignettes/prebuilt/2022_dmta_pathway.rmd index f787daf2..1e1a0719 100644 --- a/vignettes/prebuilt/2022_dmta_pathway.rmd +++ b/vignettes/prebuilt/2022_dmta_pathway.rmd @@ -1,7 +1,7 @@ --- title: "Testing hierarchical pathway kinetics with residue data on dimethenamid and dimethenamid-P" author: Johannes Ranke -date: Last change on 8 January 2023, last compiled on `r format(Sys.time(), "%e %B %Y")` +date: Last change on 20 April 2023, last compiled on `r format(Sys.time(), "%e %B %Y")` geometry: margin=2cm bibliography: references.bib toc: true @@ -423,7 +423,6 @@ tex_listing(saem_sforb_path_1_tc_reduced, caption) ## Session info ```{r, echo = FALSE} -parallel::stopCluster(cl) sessionInfo() ``` -- cgit v1.2.1