Create degradation functions for known analytical solutions
Source:R/create_deg_func.R
create_deg_func.Rd
Create degradation functions for known analytical solutions
Usage
create_deg_func(spec, use_of_ff = c("min", "max"))
Examples
SFO_SFO <- mkinmod(
parent = mkinsub("SFO", "m1"),
m1 = mkinsub("SFO"))
#> Temporary DLL for differentials generated and loaded
FOCUS_D <- subset(FOCUS_2006_D, value != 0) # to avoid warnings
fit_1 <- mkinfit(SFO_SFO, FOCUS_D, solution_type = "analytical", quiet = TRUE)
# \dontrun{
fit_2 <- mkinfit(SFO_SFO, FOCUS_D, solution_type = "deSolve", quiet = TRUE)
if (require(rbenchmark))
benchmark(
analytical = mkinfit(SFO_SFO, FOCUS_D, solution_type = "analytical", quiet = TRUE),
deSolve = mkinfit(SFO_SFO, FOCUS_D, solution_type = "deSolve", quiet = TRUE),
replications = 2)
#> Loading required package: rbenchmark
#> test replications elapsed relative user.self sys.self user.child
#> 1 analytical 2 0.24 1.000 0.240 0 0
#> 2 deSolve 2 0.31 1.292 0.309 0 0
#> sys.child
#> 1 0
#> 2 0
DFOP_SFO <- mkinmod(
parent = mkinsub("DFOP", "m1"),
m1 = mkinsub("SFO"))
#> Temporary DLL for differentials generated and loaded
benchmark(
analytical = mkinfit(DFOP_SFO, FOCUS_D, solution_type = "analytical", quiet = TRUE),
deSolve = mkinfit(DFOP_SFO, FOCUS_D, solution_type = "deSolve", quiet = TRUE),
replications = 2)
#> test replications elapsed relative user.self sys.self user.child
#> 1 analytical 2 0.403 1.000 0.402 0 0
#> 2 deSolve 2 0.539 1.337 0.538 0 0
#> sys.child
#> 1 0
#> 2 0
# }