context("Analytical solutions for coupled models") test_that("The analytical solutions for SFO-SFO are correct", { skip_on_cran() # No sink, no formation fractions SFO_SFO_nosink <- mkinmod( parent = mkinsub("SFO", to = "m1", sink = FALSE), m1 = mkinsub("SFO"), use_of_ff = "min", quiet = TRUE) f_sfo_sfo_nosink <- mkinfit(SFO_SFO_nosink, FOCUS_D, quiet = TRUE) f_sfo_sfo_nosink_deSolve <- mkinfit(SFO_SFO_nosink, FOCUS_D, solution_type = "deSolve", quiet = TRUE) expect_equal( parms(f_sfo_sfo_nosink), parms(f_sfo_sfo_nosink_deSolve) ) # No sink, with formation fractions SFO_SFO.ff_nosink <- mkinmod( parent = mkinsub("SFO", to = "m1", sink = FALSE), m1 = mkinsub("SFO"), use_of_ff = "max", quiet = TRUE) f_sfo_sfo_nosink <- mkinfit(SFO_SFO.ff_nosink, FOCUS_D, quiet = TRUE) f_sfo_sfo_nosink_deSolve <- mkinfit(SFO_SFO.ff_nosink, FOCUS_D, solution_type = "deSolve", quiet = TRUE) expect_equal( parms(f_sfo_sfo_nosink), parms(f_sfo_sfo_nosink_deSolve) ) # Without formation fraction f_sfo_sfo_analytical <- mkinfit(SFO_SFO, FOCUS_D, solution_type = "analytical", quiet = TRUE) expect_equal( parms(f_sfo_sfo_analytical), parms(f_sfo_sfo_desolve) ) # With formation fraction f_sfo_sfo.ff_desolve <- mkinfit(SFO_SFO.ff, FOCUS_D, solution_type = "deSolve", quiet = TRUE) expect_equal( parms(f_sfo_sfo.ff), parms(f_sfo_sfo.ff_desolve), tolerance = 5e-6 ) }) test_that("The analytical solution for DFOP-SFO are correct", { skip_on_cran() # With formation fraction f_dfop_sfo_analytical <- mkinfit(DFOP_SFO, FOCUS_D, solution_type = "analytical", quiet = TRUE) f_dfop_sfo_desolve <- mkinfit(DFOP_SFO, FOCUS_D, solution_type = "deSolve", quiet = TRUE) expect_equal( parms(f_dfop_sfo_analytical), parms(f_dfop_sfo_desolve), tolerance = 5e-6 ) })