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# Copyright (C) 2012 René Lehmann, Johannes Ranke
# Contact: jranke@uni-bremen.de
# This file is part of the R package mkin
# mkin is free software: you can redistribute it and/or modify it under the
# terms of the GNU General Public License as published by the Free Software
# Foundation, either version 3 of the License, or (at your option) any later
# version.
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
# You should have received a copy of the GNU General Public License along with
# this program. If not, see <http://www.gnu.org/licenses/>
ilr <- function(x) {
z <- vector()
for (i in 1:(length(x) - 1)) {
z[i] <- sqrt(i/(i+1)) * log((prod(x[1:i]))^(1/i) / x[i+1])
}
return(z)
}
invilr<-function(x) {
D <- length(x) + 1
z <- c(x, 0)
y <- rep(0, D)
s <- sqrt(1:D*2:(D+1))
q <- z/s
y[1] <- sum(q[1:D])
for (i in 2:D) {
y[i] <- sum(q[i:D]) - sqrt((i-1)/i) * z[i-1]
}
z <- vector()
for (i in 1:D) {
z[i] <- exp(y[i])/sum(exp(y))
}
# Work around a numerical problem with NaN values returned by the above
# Only works if there is only one NaN value: replace it with 1
# if the sum of the other components is < 1e-10
if (sum(is.na(z)) == 1 && sum(z[!is.na(z)]) < 1e-10)
z = ifelse(is.na(z), 1, z)
return(z)
}
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