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kinetic models fitted with mkinfit — max_twa_parent"><meta property="og:description" content="This function calculates maximum moving window time weighted average
concentrations (TWAs) for kinetic models fitted with mkinfit.
Currently, only calculations for the parent are implemented for the SFO,
FOMC, DFOP and HS models, using the analytical formulas given in the PEC
soil section of the FOCUS guidance."><!-- mathjax --><script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/MathJax.js" integrity="sha256-nvJJv9wWKEm88qvoQl9ekL2J+k/RWIsaSScxxlsrv8k=" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/config/TeX-AMS-MML_HTMLorMML.js" integrity="sha256-84DKXVJXs0/F8OTMzX4UR909+jtl4G7SPypPavF+GfA=" crossorigin="anonymous"></script><!--[if lt IE 9]>
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<img src="" class="logo" alt=""><h1>Function to calculate maximum time weighted average concentrations from
kinetic models fitted with mkinfit</h1>
<small class="dont-index">Source: <a href="https://github.com/jranke/mkin/blob/HEAD/R/max_twa_parent.R" class="external-link"><code>R/max_twa_parent.R</code></a></small>
<div class="d-none name"><code>max_twa_parent.Rd</code></div>
</div>
<div class="ref-description section level2">
<p>This function calculates maximum moving window time weighted average
concentrations (TWAs) for kinetic models fitted with <code><a href="mkinfit.html">mkinfit</a></code>.
Currently, only calculations for the parent are implemented for the SFO,
FOMC, DFOP and HS models, using the analytical formulas given in the PEC
soil section of the FOCUS guidance.</p>
</div>
<div class="section level2">
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">max_twa_parent</span><span class="op">(</span><span class="va">fit</span>, <span class="va">windows</span><span class="op">)</span></span>
<span></span>
<span><span class="fu">max_twa_sfo</span><span class="op">(</span>M0 <span class="op">=</span> <span class="fl">1</span>, <span class="va">k</span>, <span class="va">t</span><span class="op">)</span></span>
<span></span>
<span><span class="fu">max_twa_fomc</span><span class="op">(</span>M0 <span class="op">=</span> <span class="fl">1</span>, <span class="va">alpha</span>, <span class="va">beta</span>, <span class="va">t</span><span class="op">)</span></span>
<span></span>
<span><span class="fu">max_twa_dfop</span><span class="op">(</span>M0 <span class="op">=</span> <span class="fl">1</span>, <span class="va">k1</span>, <span class="va">k2</span>, <span class="va">g</span>, <span class="va">t</span><span class="op">)</span></span>
<span></span>
<span><span class="fu">max_twa_hs</span><span class="op">(</span>M0 <span class="op">=</span> <span class="fl">1</span>, <span class="va">k1</span>, <span class="va">k2</span>, <span class="va">tb</span>, <span class="va">t</span><span class="op">)</span></span></code></pre></div>
</div>
<div class="section level2">
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt>fit</dt>
<dd><p>An object of class <code><a href="mkinfit.html">mkinfit</a></code>.</p></dd>
<dt>windows</dt>
<dd><p>The width of the time windows for which the TWAs should be
calculated.</p></dd>
<dt>M0</dt>
<dd><p>The initial concentration for which the maximum time weighted
average over the decline curve should be calculated. The default is to use
a value of 1, which means that a relative maximum time weighted average
factor (f_twa) is calculated.</p></dd>
<dt>k</dt>
<dd><p>The rate constant in the case of SFO kinetics.</p></dd>
<dt>t</dt>
<dd><p>The width of the time window.</p></dd>
<dt>alpha</dt>
<dd><p>Parameter of the FOMC model.</p></dd>
<dt>beta</dt>
<dd><p>Parameter of the FOMC model.</p></dd>
<dt>k1</dt>
<dd><p>The first rate constant of the DFOP or the HS kinetics.</p></dd>
<dt>k2</dt>
<dd><p>The second rate constant of the DFOP or the HS kinetics.</p></dd>
<dt>g</dt>
<dd><p>Parameter of the DFOP model.</p></dd>
<dt>tb</dt>
<dd><p>Parameter of the HS model.</p></dd>
</dl></div>
<div class="section level2">
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
<p>For <code>max_twa_parent</code>, a numeric vector, named using the
<code>windows</code> argument. For the other functions, a numeric vector of
length one (also known as 'a number').</p>
</div>
<div class="section level2">
<h2 id="references">References<a class="anchor" aria-label="anchor" href="#references"></a></h2>
<p>FOCUS (2006) “Guidance Document on Estimating Persistence
and Degradation Kinetics from Environmental Fate Studies on Pesticides in
EU Registration” Report of the FOCUS Work Group on Degradation Kinetics,
EC Document Reference Sanco/10058/2005 version 2.0, 434 pp,
<a href="http://esdac.jrc.ec.europa.eu/projects/degradation-kinetics" class="external-link">http://esdac.jrc.ec.europa.eu/projects/degradation-kinetics</a></p>
</div>
<div class="section level2">
<h2 id="author">Author<a class="anchor" aria-label="anchor" href="#author"></a></h2>
<p>Johannes Ranke</p>
</div>
<div class="section level2">
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span></span></span>
<span class="r-in"><span> <span class="va">fit</span> <span class="op"><-</span> <span class="fu"><a href="mkinfit.html">mkinfit</a></span><span class="op">(</span><span class="st">"FOMC"</span>, <span class="va">FOCUS_2006_C</span>, quiet <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span></span></span>
<span class="r-in"><span> <span class="fu">max_twa_parent</span><span class="op">(</span><span class="va">fit</span>, <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">7</span>, <span class="fl">21</span><span class="op">)</span><span class="op">)</span></span></span>
<span class="r-out co"><span class="r-pr">#></span> 7 21 </span>
<span class="r-out co"><span class="r-pr">#></span> 34.71343 18.22124 </span>
<span class="r-in"><span></span></span>
</code></pre></div>
</div>
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