blob: 877d51930b49d77238a6fd6f4f4ff2241042612b (
plain) (
blame)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
|
Loading mkin
Testing mkin
✔ | OK F W S | Context
✔ | 2 | Export dataset for reading into CAKE
✔ | 13 | Results for FOCUS D established in expertise for UBA (Ranke 2014) [3.5 s]
✔ | 4 | Calculation of FOCUS chi2 error levels [2.2 s]
✔ | 4 | Fitting the SFORB model [1.7 s]
✔ | 5 | Calculation of Akaike weights
✔ | 10 | Confidence intervals and p-values [9.4 s]
✔ | 14 | Error model fitting [37.5 s]
✔ | 6 | Test fitting the decline of metabolites from their maximum [0.8 s]
✔ | 1 | Fitting the logistic model [0.9 s]
✔ | 1 | Test dataset class mkinds used in gmkin
✔ | 12 | Special cases of mkinfit calls [2.3 s]
✔ | 9 | mkinmod model generation and printing [0.2 s]
✔ | 3 | Model predictions with mkinpredict [0.3 s]
✔ | 16 | Evaluations according to 2015 NAFTA guidance [4.1 s]
✖ | 0 1 | Nonlinear mixed-effects models [1.3 s]
────────────────────────────────────────────────────────────────────────────────
test_nlme.R:37: error: nlme_function works correctly
konnte Funktion "nlme_f" nicht finden
Backtrace:
1. nlme::nlme(...) tests/testthat/test_nlme.R:37:2
2. nlme::nlme.formula(...)
3. [ base::eval(...) ] with 1 more call
5. [ base::eval(...) ] with 1 more call
────────────────────────────────────────────────────────────────────────────────
✔ | 4 | Calculation of maximum time weighted average concentrations (TWAs) [2.2 s]
✔ | 3 | Summary
✔ | 11 | Plotting [0.6 s]
✔ | 4 | AIC calculation
✔ | 2 | Residuals extracted from mkinfit models
✔ | 2 | Complex test case from Schaefer et al. (2007) Piacenza paper [5.3 s]
✔ | 1 | Summaries of old mkinfit objects
✔ | 4 | Results for synthetic data established in expertise for UBA (Ranke 2014) [7.0 s]
✔ | 7 1 | Hypothesis tests [31.9 s]
────────────────────────────────────────────────────────────────────────────────
test_tests.R:60: skip: We can do a likelihood ratio test using an update specification
Reason: This errors out if called by testthat while it works in a normal R session
────────────────────────────────────────────────────────────────────────────────
══ Results ═════════════════════════════════════════════════════════════════════
Duration: 111.4 s
OK: 138
Failed: 1
Warnings: 0
Skipped: 1
|
