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-rw-r--r--ChangeLog12
-rw-r--r--R/PELMO_runs.R2
-rw-r--r--docs/reference/PELMO_runs.html4
-rw-r--r--man/PELMO_runs.Rd2
4 files changed, 16 insertions, 4 deletions
diff --git a/ChangeLog b/ChangeLog
index 9cb0481..ff03ccb 100644
--- a/ChangeLog
+++ b/ChangeLog
@@ -1,3 +1,15 @@
+commit 4e696997516543e29119e94d67283f513be4484d
+Author: Johannes Ranke <jranke@uni-bremen.de>
+Date: 2017-01-30 18:08:50 +0100
+
+ Regenerate static documentation
+
+commit 03bda75d343402dad99df2aad55611e11279b833
+Author: Johannes Ranke <jranke@uni-bremen.de>
+Date: 2017-01-30 18:04:53 +0100
+
+ Correct psm file in the example with metabolites
+
commit 39d202b0a0f833c756bc98fb4961483de1b15353
Author: Johannes Ranke <jranke@uni-bremen.de>
Date: 2017-01-30 16:14:15 +0100
diff --git a/R/PELMO_runs.R b/R/PELMO_runs.R
index e5a78ff..0f134e0 100644
--- a/R/PELMO_runs.R
+++ b/R/PELMO_runs.R
@@ -25,7 +25,7 @@
#' @param execute Should PELMO be executed directly?
#' @param cores The number of cores to execute PELMO runs in parallel
#' @param evaluate Should the results be returned?
-#' @param overwrite Should an existing run directories be overwritten
+#' @param overwrite Should existing run directories be overwritten?
#' @references PELMO.installeR \url{https://jranke.github.io/PELMO.installeR}
#'
#' Wine \url{https://winehq.org}
diff --git a/docs/reference/PELMO_runs.html b/docs/reference/PELMO_runs.html
index 1e2cc8e..23a7a30 100644
--- a/docs/reference/PELMO_runs.html
+++ b/docs/reference/PELMO_runs.html
@@ -109,7 +109,7 @@ as used in <code><a href='FOCUS_GW_scenarios_2012.html'>FOCUS_GW_scenarios_2012<
<dt>evaluate</dt>
<dd>Should the results be returned?</dd>
<dt>overwrite</dt>
- <dd>Should an existing run directories be overwritten</dd>
+ <dd>Should existing run directories be overwritten?</dd>
</dl>
<h2 class="hasAnchor" id="value"><a class="anchor" href="#value"></a>Value</h2>
@@ -171,7 +171,7 @@ the period.plm file generated by the FOCUS PELMO GUI.</p>
#&gt;
#&gt; </div><div class='input'><span class='co'># We get exactly the same PECgw values (on Linux, calling PELMO using Wine).</span>
<span class='fu'>print</span>(<span class='no'>time_1</span>)</div><div class='output co'>#&gt; User System verstrichen
-#&gt; 231.948 0.568 56.887 </div><div class='input'>
+#&gt; 228.532 0.540 57.195 </div><div class='input'>
<span class='co'># Demonstrate some results with metabolites.</span>
<span class='no'>runs_2</span> <span class='kw'>&lt;-</span> <span class='fu'>list</span>(<span class='fu'>list</span>(<span class='kw'>psm</span> <span class='kw'>=</span> <span class='st'>'Pesticide_D_1_May_every_other_year_mets'</span>,
<span class='kw'>win</span> <span class='kw'>=</span> <span class='fu'>c</span>(<span class='st'>"Cha"</span>, <span class='st'>"Ham"</span>, <span class='st'>"Kre"</span>)))
diff --git a/man/PELMO_runs.Rd b/man/PELMO_runs.Rd
index ce5c7af..aa02a89 100644
--- a/man/PELMO_runs.Rd
+++ b/man/PELMO_runs.Rd
@@ -34,7 +34,7 @@ as used in \code{\link{FOCUS_GW_scenarios_2012}}.}
\item{evaluate}{Should the results be returned?}
-\item{overwrite}{Should an existing run directories be overwritten}
+\item{overwrite}{Should existing run directories be overwritten?}
}
\value{
If evaluate is TRUE, a list of lists of matrices holding the

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