| Age | Commit message (Collapse) | Author | Files | Lines | |
|---|---|---|---|---|---|
| 2017-08-24 | Build for windows using roxygen from master | Johannes Ranke | 1 | -0/+26 | |
| Now that roxygen can handle UTF8 characters in function arguments thanks to Hadley Wickham and Jim Hester | |||||
| 2017-07-21 | New Option for Step 1, fix example, update docs | Johannes Ranke | 1 | -2/+11 | |
| Also add the reference file for testing Step12 input file generation | |||||
| 2017-06-22 | Add scenario, region and season to run name | Johannes Ranke | 1 | -0/+33 | |
| 2017-06-20 | Tests for Step 1 and 2 (input file only) pass, PELMO fails | Johannes Ranke | 1 | -0/+16 | |
| There are spurious errors in the output PELMO generates. Two examples are in the test.log | |||||
| 2017-06-19 | Single line of generated Step12 input file partially validated | Johannes Ranke | 1 | -0/+24 | |
| 2017-05-24 | Re-enable PELMO examples and tests | Johannes Ranke | 1 | -0/+12 | |
| - Add .gitattributes to make sure CRLF line endings are kept for PELMO .psm files - Update static docs | |||||
| 2017-05-17 | Simplify tests where possible | Johannes Ranke | 1 | -0/+28 | |
| 2017-05-16 | Add TWA concentrations for days > 1, fix link | Johannes Ranke | 1 | -0/+9 | |
| Now we have seven test calculations for the Step 1 calculator, all perfectly passing. This provides confidence that this is a correct reimplementation of the Step 1 part of the Step 1/2 calculator. | |||||
| 2017-05-16 | Finish the Step 1 calculator including tests | Johannes Ranke | 1 | -0/+18 | |
| Some cleaning up. PELMO facilities do not currently work at my end, as I have no working wine installation on this computer | |||||
| 2017-03-28 | Update Changelog | Johannes Ranke | 1 | -0/+18 | |
| 2017-01-31 | Small documentation fix | Johannes Ranke | 1 | -0/+12 | |
| 2017-01-30 | Correct psm file in the example with metabolites | Johannes Ranke | 1 | -0/+15 | |
| 2017-01-30 | Test reproducing the FOCUS Summary information | Johannes Ranke | 1 | -0/+14 | |
| generated from the FOCUS PELMO GUI, as copied into the text files in the testdata directory. | |||||
| 2017-01-30 | Use relative tolerance of 1e-6 for flux test | Johannes Ranke | 1 | -0/+12 | |
| to pass test also for more extreme situations as in the current test data. | |||||
| 2017-01-30 | Better documentation of PELMO_runs(). | Johannes Ranke | 1 | -1/+7 | |
| 2017-01-29 | Setting up PELMO runs, execution and evaluation | Johannes Ranke | 1 | -0/+29 | |
| It all works! | |||||
| 2017-01-27 | Also test run with metabolites | Johannes Ranke | 1 | -2/+9 | |
| 2017-01-27 | Set up FOCUS PELMO runs and run them in parallel | Johannes Ranke | 1 | -0/+48 | |
| - This works on Linux using wine - PELMO runs (including pelmo.inp files) are correctly generated - The PLM files for FOCUS Pesticide_D in the test data archive are correctly reproduced - The data files (including FOCUS groundwater scenario data) are now created and documented in R files | |||||
| 2017-01-19 | Corrections in the documentation | Johannes Ranke | 1 | -0/+12 | |
| 2017-01-19 | Fix one_box for ini = 1, use in sawtooth examples | Johannes Ranke | 1 | -0/+13 | |
| 2017-01-19 | Move mkin::twa to pfm::max_twa.mkinfit | Johannes Ranke | 1 | -0/+6 | |
| - Add max_twa.mkinfit() recently introduced to mkin as mkin::twa() but never released with it - Add a test to check max_twa.one_box() against analytical solutions in max_twa.mkinfit(). - Clean up R CMD check - Update docs | |||||
| 2017-01-19 | Make max_twa() a bit safer | Johannes Ranke | 1 | -0/+12 | |
| 2017-01-19 | Fix order of arguments to one_box, correct docs | Johannes Ranke | 1 | -0/+56 | |
| 2017-01-18 | One box time series and twa values | Johannes Ranke | 1 | -0/+17 | |
| - one_box() creates decline time series from mkinfit objects or simply from a half-life - sawtooth() generates sawtooth curves for arbitrary application patterns and decline models - twa() calculates moving window averages - max_twa() gives their maxima and - plot.one_box() can plot series generated by one_box() or sawtooth(), optionally adding a greay rectangle to illustrate the maximum moving window time weighted average | |||||
| 2016-12-22 | Fix reading in times from .out files | Johannes Ranke | 1 | -0/+17 | |
| The code from the previous commit was broken. Also, the time zone for the times that are read is now wet to 'UTC', in order to avoid setting different time zones due to daylight savings, which introduces artificial one-hour offsets on changeover days. | |||||
| 2016-12-12 | Fix reading .out for acronyms containing numbers | Johannes Ranke | 1 | -0/+12 | |
| 2016-09-27 | Reorganise repository using standard package layout | Johannes Ranke | 1 | -0/+392 | |
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index : pfm | |
| Utilities for pesticide fate modelling (also on github) | Johannes Ranke |
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