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2024-01-31Reorganise data generationRanke Johannes1-5/+8
- Use inst/data_generation for R code generating data as in some of my other packages - data/*.RData files were checked using https://github.com/jranke/dotfiles/blob/main/bin/rda_diff contents were not changed - Remove ChangeLog, the history is in the git logs - Update docs and some links contained therein - use \doi{} markup - Move logs to log directory
2023-11-12Start RStudio project, some maintenanceRanke Johannes1-5/+5
2022-11-11mkin and chents from github for check on travisJohannes Ranke1-1/+1
2022-11-11Remove Remotes: field from DESCRIPTIONJohannes Ranke1-1/+0
It causes trouble with remotes::install_deps() on travis, see the various previous build logs.
2022-11-11Typo, remove PELMO related suggestionsJohannes Ranke1-6/+2
PELMO related functions are not used in pfm, so apart from advertising, these suggestions did not do anything.
2022-11-10set_nd_nq is now in mkin, fix Steps12 bugJohannes Ranke1-4/+4
If a scenario with a slash "/" was selected in PEC_sw_focus(), the Step 2 file generated giving an error (path not found) in the Steps12 calculator, because the scenario name is part of the "compound" name in this implementation, in order to show it in the list that the calculator presents.
2021-11-19Update docs and logsJohannes Ranke1-2/+2
2020-07-23Update docs, use R6 support of roxygenJohannes Ranke1-4/+4
2020-07-07Remove copyright headers, update TOXSWA_cwa testJohannes Ranke1-1/+1
- The window column of the windows component of a TOXSWA_cwa object is not a factor any more, but a character vector. - testthat::expect_equal_to_reference is replaced by testthat::expect_known_output, so we can have git diff show what has changed
2020-07-07Adapt pfm_degradation to current mkinJohannes Ranke1-2/+2
use_of_ff = "max" is now the default
2020-06-17TSCF estimation equations, update docsJohannes Ranke1-1/+1
Briggs et al. (1982) and Dettenmaier et al. (2009)
2020-04-16Make na.rm = FALSE the default for geomean()Johannes Ranke1-2/+2
This makes more sense and is in line with mean() from base R. Adapt tests and update docs.
2020-02-19Check in last build logJohannes Ranke1-1/+1
2019-10-23Updated ChangeLog and DESCRIPTIONJohannes Ranke1-1/+1
2019-10-15Residue processing for depth profiles over timeJohannes Ranke1-1/+1
2019-10-10Finish documentation of set_nd and test itJohannes Ranke1-1/+1
2019-10-09Function to set non-detects in residue seriesJohannes Ranke1-1/+1
2019-09-27Fix for UK drainage, some EFSA interception and washoffJohannes Ranke1-2/+2
- PEC_sw_drainage_UK() gave results that were a little bit too high for the substances with the highest Koc (>4000), as I used 0.01% instead of 0.008% for them. This must have come from an old vesion of the UK data requirements handbook, at least I do not have another explanation - Add EFSA interception (from 2014 DegT50 guidance) and tier 1 crop wash-off factors (from 2017 PEC soil guidance) for some major arable crops - Update docs
2019-09-18Add url: tag to _pkgdown.yml, typo, update docsJohannes Ranke1-2/+2
2019-05-14Version bump and doc updateJohannes Ranke1-1/+1
2019-05-14Add Exposit version 3.01a2 for runoff calculationsJohannes Ranke1-1/+1
At the request of Muris Korkaric (Agroscope). This is for 3 m buffer only and provides consistency with earlier calculations
2019-04-29Additional runoff data used by AgroscopeJohannes Ranke1-1/+1
2019-04-26Another take on completing the drift dataJohannes Ranke1-2/+2
The R script I used yesterday got lost because I used the .Rd file that got overwritten by roxygen later.
2019-04-25Add more drift data, especially 3 m field crop dataJohannes Ranke1-2/+2
To support Agroscope in doing lots of PEC calculations for Switzerland
2019-02-21Use codecovJohannes Ranke1-2/+3
2019-02-19Add grImport to Suggests:Johannes Ranke1-0/+1
Because chent which in turn suggests grImport is loaded from github which obviously does not pull grImport
2019-02-19Add Remotes: field for travisJohannes Ranke1-0/+3
2019-02-19Add German drainage calculations using Exposit 3.02Johannes Ranke1-1/+1
2019-02-08Make SSLRC and PEC drainage UK accept NA for KocJohannes Ranke1-1/+1
2019-01-31Separate out PELMO utilities into rPELMOJohannes Ranke1-4/+5
2018-09-27Create valid Step 1 files with fewer argumentsJohannes Ranke1-1/+1
2018-09-22Add test and update docsJohannes Ranke1-1/+1
2018-09-21Support FOMC in PEC_soilJohannes Ranke1-3/+2
2018-07-11Improve PELMO testsJohannes Ranke1-1/+1
2018-07-10EFSA PEC soil guidance from 2017Johannes Ranke1-2/+2
- Implement the new guidance as well as possible - Maintenance work addressing CRAN checks
2018-07-04Some documentation updatesJohannes Ranke1-1/+1
Document that TOXSWA 5.5.3 is supported in the help files
2018-06-11Adapt to TOXSWA 5.5.3Johannes Ranke1-2/+2
2018-06-08Add actual/twa calcs for FOMC, typoJohannes Ranke1-1/+1
2018-06-06Rebuild docs with pkgdown 1.1.0Johannes Ranke1-1/+2
2018-03-01Add a README.html for cgit.jrwb.deJohannes Ranke1-1/+1
2018-03-01Rebuild static docs using current pkdownJohannes Ranke1-1/+1
Process PELMO runs in example using 15 (hyperthreading) cores and show processor info.
2018-01-29Documentation fixes and updatesJohannes Ranke1-1/+1
2018-01-29Correction of return value documentation for PEC_sw_exposit_runoffJohannes Ranke1-1/+1
Rebuild pkgdown documentation
2017-12-15Improve handling of ยต in y axis for plot.TOXSWA_cwaJohannes Ranke1-1/+1
2017-11-04Option to thin low TOXSWA PECsw data for plottingJohannes Ranke1-1/+1
to reduce the file size of plots e.g. as PDF files
2017-11-03Also return runoff percentagesJohannes Ranke1-1/+1
2017-10-27Exposit runoff calculations for surface waterJohannes Ranke1-1/+1
2017-10-23Typos, rebuild static docsJohannes Ranke1-2/+2
2017-10-10Add ORCIDJohannes Ranke1-1/+2
2017-10-09Write Step 2 input files on windowsJohannes Ranke1-2/+2

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