| Age | Commit message (Collapse) | Author | Files | Lines | |
|---|---|---|---|---|---|
| 2020-04-16 | Make na.rm = FALSE the default for geomean() | Johannes Ranke | 1 | -2/+2 | |
| This makes more sense and is in line with mean() from base R. Adapt tests and update docs. | |||||
| 2019-10-15 | Residue processing for depth profiles over time | Johannes Ranke | 1 | -11/+53 | |
| 2019-10-10 | Fix set_nd for metabolites, handle zero at time zero | Johannes Ranke | 1 | -0/+2 | |
| 2019-10-10 | Finish documentation of set_nd and test it | Johannes Ranke | 1 | -0/+42 | |
| 2019-09-27 | Fix for UK drainage, some EFSA interception and washoff | Johannes Ranke | 1 | -2/+5 | |
| - PEC_sw_drainage_UK() gave results that were a little bit too high for the substances with the highest Koc (>4000), as I used 0.01% instead of 0.008% for them. This must have come from an old vesion of the UK data requirements handbook, at least I do not have another explanation - Add EFSA interception (from 2014 DegT50 guidance) and tier 1 crop wash-off factors (from 2017 PEC soil guidance) for some major arable crops - Update docs | |||||
| 2019-02-19 | Add another test for Exposit drainage | Johannes Ranke | 1 | -0/+8 | |
| to test overriding the mobility group derived from Koc | |||||
| 2019-02-19 | Add German drainage calculations using Exposit 3.02 | Johannes Ranke | 2 | -19/+75 | |
| 2019-01-31 | Separate out PELMO utilities into rPELMO | Johannes Ranke | 1 | -201/+0 | |
| 2018-09-22 | Add test and update docs | Johannes Ranke | 1 | -0/+20 | |
| 2018-07-11 | Improve PELMO tests | Johannes Ranke | 1 | -19/+15 | |
| 2018-07-10 | EFSA PEC soil guidance from 2017 | Johannes Ranke | 3 | -36/+91 | |
| - Implement the new guidance as well as possible - Maintenance work addressing CRAN checks | |||||
| 2017-10-27 | Exposit runoff calculations for surface water | Johannes Ranke | 1 | -0/+25 | |
| 2017-06-22 | Add scenario, region and season to run name | Johannes Ranke | 1 | -19/+23 | |
| 2017-06-20 | Tests for Step 1 and 2 (input file only) pass, PELMO fails | Johannes Ranke | 1 | -28/+88 | |
| There are spurious errors in the output PELMO generates. Two examples are in the test.log | |||||
| 2017-06-19 | Single line of generated Step12 input file partially validated | Johannes Ranke | 1 | -68/+104 | |
| 2017-06-17 | Start with the generation of an input file | Johannes Ranke | 1 | -2/+13 | |
| 2017-05-24 | Re-enable PELMO examples and tests | Johannes Ranke | 1 | -6/+20 | |
| - Add .gitattributes to make sure CRLF line endings are kept for PELMO .psm files - Update static docs | |||||
| 2017-05-17 | Simplify tests where possible | Johannes Ranke | 1 | -11/+6 | |
| 2017-05-16 | Add TWA concentrations for days > 1, fix link | Johannes Ranke | 1 | -14/+14 | |
| Now we have seven test calculations for the Step 1 calculator, all perfectly passing. This provides confidence that this is a correct reimplementation of the Step 1 part of the Step 1/2 calculator. | |||||
| 2017-05-16 | Finish the Step 1 calculator including tests | Johannes Ranke | 2 | -16/+88 | |
| Some cleaning up. PELMO facilities do not currently work at my end, as I have no working wine installation on this computer | |||||
| 2017-05-15 | Start of an Steps 1/2 calculator in R | Johannes Ranke | 1 | -0/+52 | |
| 2017-01-30 | Test reproducing the FOCUS Summary information | Johannes Ranke | 1 | -1/+35 | |
| generated from the FOCUS PELMO GUI, as copied into the text files in the testdata directory. | |||||
| 2017-01-30 | Use relative tolerance of 1e-6 for flux test | Johannes Ranke | 1 | -1/+3 | |
| to pass test also for more extreme situations as in the current test data. | |||||
| 2017-01-29 | Setting up PELMO runs, execution and evaluation | Johannes Ranke | 1 | -18/+56 | |
| It all works! | |||||
| 2017-01-27 | Also test run with metabolites | Johannes Ranke | 1 | -30/+33 | |
| 2017-01-27 | Set up FOCUS PELMO runs and run them in parallel | Johannes Ranke | 2 | -0/+101 | |
| - This works on Linux using wine - PELMO runs (including pelmo.inp files) are correctly generated - The PLM files for FOCUS Pesticide_D in the test data archive are correctly reproduced - The data files (including FOCUS groundwater scenario data) are now created and documented in R files | |||||
| 2017-01-19 | Move mkin::twa to pfm::max_twa.mkinfit | Johannes Ranke | 1 | -0/+11 | |
| - Add max_twa.mkinfit() recently introduced to mkin as mkin::twa() but never released with it - Add a test to check max_twa.one_box() against analytical solutions in max_twa.mkinfit(). - Clean up R CMD check - Update docs | |||||
| 2016-09-27 | Reorganise repository using standard package layout | Johannes Ranke | 12 | -0/+262 | |
 |
index : pfm | |
| Utilities for pesticide fate modelling (also on github) | Johannes Ranke |
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