From 90e5ff0a9fdadd65e179c04c7d43b4db6e301984 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Mon, 6 Mar 2017 17:59:16 +0100 Subject: Move static docs to pkdown.jrwb.de, update them --- README.md | 6 +++--- docs/index.html | 8 ++++---- docs/reference/PELMO_runs.html | 2 +- inst/staticdocs/index.r | 42 ------------------------------------------ 4 files changed, 8 insertions(+), 50 deletions(-) delete mode 100644 inst/staticdocs/index.r diff --git a/README.md b/README.md index a0de830..b4b2caa 100644 --- a/README.md +++ b/README.md @@ -33,13 +33,13 @@ install_github("jranke/pfm", quick = TRUE) ## Use -Please refer to the [reference](http://jranke.github.io/pfm/reference/index.html). +Please refer to the [reference](http://pkgdown.jrwb.de/pfm/reference/index.html). ## Examples One recent nice example of the usage of this package is the visualisation of a time weighted average for a sawtooth curve obtained from several overlays -of mkinfit predictions as shown [here](http://jranke.github.io/pfm/reference/plot.one_box.html). +of mkinfit predictions as shown [here](http://pkgdown.jrwb.de/pfm/reference/plot.one_box.html). Another, even more recent example shows how FOCUS PELMO can be run in parallel under Linux -as shown [here](http://jranke.github.io/pfm/reference/PELMO_runs.html). +as shown [here](http://pkgdown.jrwb.de/pfm/reference/PELMO_runs.html). diff --git a/docs/index.html b/docs/index.html index 0c53fe9..0a45d75 100644 --- a/docs/index.html +++ b/docs/index.html @@ -64,18 +64,18 @@ this program. If not, see <http://www.gnu.org/license Installation

You can install the package from github, e.g. using the devtools package. Using quick = TRUE skips docs, multiple-architecture builds, demos, and vignettes, to make installation as fast and painless as possible.

library(devtools)
-install_github("jranke/pfm", subdir = "pkg", quick = TRUE)
+install_github("jranke/pfm", quick = TRUE)

Use

-

Please refer to the reference.

+

Please refer to the reference.

Examples

-

One recent nice example of the usage of this package is the visualisation of a time weighted average for a sawtooth curve obtained from several overlays of mkinfit predictions as shown here.

-

Another, even more recent example shows how FOCUS PELMO can be run in parallel under Linux as shown here.

+

One recent nice example of the usage of this package is the visualisation of a time weighted average for a sawtooth curve obtained from several overlays of mkinfit predictions as shown here.

+

Another, even more recent example shows how FOCUS PELMO can be run in parallel under Linux as shown here.

diff --git a/docs/reference/PELMO_runs.html b/docs/reference/PELMO_runs.html index 23a7a30..4b7f7fb 100644 --- a/docs/reference/PELMO_runs.html +++ b/docs/reference/PELMO_runs.html @@ -171,7 +171,7 @@ the period.plm file generated by the FOCUS PELMO GUI.

#> #>
# We get exactly the same PECgw values (on Linux, calling PELMO using Wine). print(time_1)
#> User System verstrichen -#> 228.532 0.540 57.195
+#> 229.448 0.524 57.021
# Demonstrate some results with metabolites. runs_2 <- list(list(psm = 'Pesticide_D_1_May_every_other_year_mets', win = c("Cha", "Ham", "Kre"))) diff --git a/inst/staticdocs/index.r b/inst/staticdocs/index.r deleted file mode 100644 index 421071c..0000000 --- a/inst/staticdocs/index.r +++ /dev/null @@ -1,42 +0,0 @@ -sd_section( - "Degradation", - "Functions related to degradation", - c("pfm_degradation", "SFO_actual_twa") -) -sd_section( - "Mobility", - "Indicators related to mobility", - c("GUS", "SSLRC_mobility_classification") -) -sd_section( - "Soil", - "Predicted environmental concentrations in soil", - c("PEC_soil", "soil_scenario_data_EFSA_2015") -) -sd_section( - "Surface water", - "Predicted environmental concentrations in surface water", - c( - "PEC_sw_drift", "PEC_sw_sed", - "drift_data_JKI", - "PEC_sw_drainage_UK", - "TOXSWA_cwa", - "read.TOXSWA_cwa", - "plot.TOXSWA_cwa" - ) -) -sd_section( - "Groundwater", - "Predicted environmental concentrations in groundwater", - c("FOCUS_GW_scenarios_2012") -) -sd_section( - "Chemical entities", - "Work with input stored in chemical entites as R objects using the chent package", - c("endpoint") -) -sd_section( - "General", - "Utilities that are generally useful", - c("geomean") -) -- cgit v1.2.3