From d66bd4aa0bf9c4d9b8793a4e308c9e80691b440f Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Sun, 12 Nov 2023 21:40:01 +0100 Subject: Enable links to source, upgrade to bootstrap 5 --- docs/reference/PEC_sw_drift.html | 309 ++++++++++++++++----------------------- 1 file changed, 127 insertions(+), 182 deletions(-) (limited to 'docs/reference/PEC_sw_drift.html') diff --git a/docs/reference/PEC_sw_drift.html b/docs/reference/PEC_sw_drift.html index e2c325b..3e1d4c8 100644 --- a/docs/reference/PEC_sw_drift.html +++ b/docs/reference/PEC_sw_drift.html @@ -1,221 +1,166 @@ - - - - - - +Calculate predicted environmental concentrations in surface water due to drift — PEC_sw_drift • pfm + Skip to contents + -Calculate predicted environmental concentrations in surface water due to drift — PEC_sw_drift • pfm +
+
+
+

Calculate predicted environmental concentrations in surface water due to drift

+ Source: R/PEC_sw_drift.R +
PEC_sw_drift.Rd
+
- - - +
+

This is a basic, vectorised form of a simple calculation of a contaminant +concentration in surface water based on complete, instantaneous mixing +with input via spray drift.

+
- - +
+

Usage

+ 
PEC_sw_drift(
+  rate,
+  applications = 1,
+  water_depth = 30,
+  drift_percentages = NULL,
+  drift_data = c("JKI", "RF"),
+  crop = "Ackerbau",
+  distances = c(1, 5, 10, 20),
+  rate_units = "g/ha",
+  PEC_units = "µg/L"
+)
+
- - - +
+

Arguments

+
rate
+

Application rate in units specified below

- - - +
applications
+

Number of applications for selection of drift percentile

+
water_depth
+

Depth of the water body in cm

- - +
drift_percentages
+

Percentage drift values for which to calculate PECsw. +'drift_data' and 'distances' if not NULL.

+
drift_data
+

Source of drift percentage data. If 'JKI', the [drift_data_JKI] +included in the package is used. If 'RF', the Rautmann formula is used, if +implemented for the crop type and number of applications

- - - - - - - - - - -
-
- - +
distances
+

The distances in m for which to get PEC values

-
-
-
-
-

Calculate predicted environmental concentrations in surface water due to drift

+
rate_units
+

Defaults to g/ha

+ + +
PEC_units
+

Requested units for the calculated PEC. Only µg/L currently supported

+ +
+
+

Value

- -
-
-

This is a basic, vectorised form of a simple calculation of a contaminant -concentration in surface water based on complete, instantaneous mixing -with input via spray drift.

+

The predicted concentration in surface water

+
+
+

Author

+

Johannes Ranke

- 
PEC_sw_drift(
-  rate,
-  applications = 1,
-  water_depth = 30,
-  drift_percentages = NULL,
-  drift_data = c("JKI", "RF"),
-  crop = "Ackerbau",
-  distances = c(1, 5, 10, 20),
-  rate_units = "g/ha",
-  PEC_units = "µg/L"
-)
- -

Arguments

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
rate

Application rate in units specified below

applications

Number of applications for selection of drift percentile

water_depth

Depth of the water body in cm

drift_percentages

Percentage drift values for which to calculate PECsw. -'drift_data' and 'distances' if not NULL.

drift_data

Source of drift percentage data. If 'JKI', the [drift_data_JKI] -included in the package is used. If 'RF', the Rautmann formula is used, if -implemented for the crop type and number of applications

crop

Crop name (use German names for JKI data), defaults to "Ackerbau"

distances

The distances in m for which to get PEC values

rate_units

Defaults to g/ha

PEC_units

Requested units for the calculated PEC. Only µg/L currently supported

- -

Value

- -

The predicted concentration in surface water

- -

Examples

- 
PEC_sw_drift(100)
#>        1 m        5 m       10 m       20 m 
-#> 0.92333333 0.19000000 0.09666667 0.05000000 
# Alternatively, we can use the formula for a single application to "Ackerbau" from the paper
-PEC_sw_drift(100, drift_data = "RF")
#>        1 m        5 m       10 m       20 m 
-#> 0.92350000 0.19114149 0.09699222 0.04921742 

-# This makes it possible to also use different substances
-PEC_sw_drift(100, distances = c(1, 3, 5, 6, 10, 20, 50, 100), drift_data = "RF")
#>        1 m        3 m        5 m        6 m       10 m       20 m       50 m 
-#> 0.92350000 0.31512171 0.19114149 0.15990435 0.09699222 0.04921742 0.02007497 
-#>      100 m 
-#> 0.01018678 

-# Using custom drift percentages is also supported
-PEC_sw_drift(100, drift_percentages = c(2.77, 0.95, 0.57, 0.48, 0.29, 0.15, 0.06, 0.03))
#>     2.77 %     0.95 %     0.57 %     0.48 %     0.29 %     0.15 %     0.06 % 
-#> 0.92333333 0.31666667 0.19000000 0.16000000 0.09666667 0.05000000 0.02000000 
-#>     0.03 % 
-#> 0.01000000
-
- -
+
+

Examples

+ 
PEC_sw_drift(100)
+#>        1 m        5 m       10 m       20 m 
+#> 0.92333333 0.19000000 0.09666667 0.05000000 
+# Alternatively, we can use the formula for a single application to "Ackerbau" from the paper
+PEC_sw_drift(100, drift_data = "RF")
+#>        1 m        5 m       10 m       20 m 
+#> 0.92350000 0.19114149 0.09699222 0.04921742 
+
+# This makes it possible to also use different substances
+PEC_sw_drift(100, distances = c(1, 3, 5, 6, 10, 20, 50, 100), drift_data = "RF")
+#>        1 m        3 m        5 m        6 m       10 m       20 m       50 m 
+#> 0.92350000 0.31512171 0.19114149 0.15990435 0.09699222 0.04921742 0.02007497 
+#>      100 m 
+#> 0.01018678 
+
+# Using custom drift percentages is also supported
+PEC_sw_drift(100, drift_percentages = c(2.77, 0.95, 0.57, 0.48, 0.29, 0.15, 0.06, 0.03))
+#>     2.77 %     0.95 %     0.57 %     0.48 %     0.29 %     0.15 %     0.06 % 
+#> 0.92333333 0.31666667 0.19000000 0.16000000 0.09666667 0.05000000 0.02000000 
+#>     0.03 % 
+#> 0.01000000 
+
+
+ - + - - - + -- cgit v1.2.3 From 4079a2c496aa4e8c6dc2a93afedcbedbf7a852b5 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Sun, 12 Nov 2023 21:59:34 +0100 Subject: Enable markdown and rebuild docs --- DESCRIPTION | 1 + docs/pkgdown.yml | 2 +- docs/reference/EFSA_washoff_2017.html | 8 ++-- docs/reference/FOCUS_GW_scenarios_2012.html | 12 +++--- docs/reference/FOCUS_Step_12_scenarios.html | 6 +-- docs/reference/FOMC_actual_twa.html | 4 +- docs/reference/GUS.html | 6 +-- docs/reference/PEC_soil.html | 40 +++++++++--------- docs/reference/PEC_sw_drainage_UK.html | 10 ++--- docs/reference/PEC_sw_drift.html | 2 +- docs/reference/PEC_sw_exposit_drainage.html | 14 +++---- docs/reference/PEC_sw_exposit_runoff.html | 14 +++---- docs/reference/PEC_sw_focus.html | 28 ++++++------- docs/reference/SFO_actual_twa.html | 4 +- docs/reference/SSLRC_mobility_classification.html | 12 +++--- docs/reference/TOXSWA_cwa.html | 32 +++++++++++++-- docs/reference/TSCF-1.png | Bin 27659 -> 40587 bytes docs/reference/TSCF.html | 6 +-- docs/reference/endpoint.html | 12 +++--- docs/reference/max_twa.html | 8 ++-- docs/reference/perc_runoff_exposit.html | 14 +++---- docs/reference/perc_runoff_reduction_exposit.html | 8 ++-- docs/reference/soil_scenario_data_EFSA_2015.html | 26 ++++++------ docs/reference/soil_scenario_data_EFSA_2017.html | 26 ++++++------ docs/search.json | 2 +- man/EFSA_washoff_2017.Rd | 8 ++-- man/FOCUS_GW_scenarios_2012.Rd | 8 ++-- man/FOCUS_Step_12_scenarios.Rd | 6 +-- man/FOMC_actual_twa.Rd | 4 +- man/GUS.Rd | 6 +-- man/PEC_soil.Rd | 48 +++++++++++----------- man/PEC_sw_drainage_UK.Rd | 12 +++--- man/PEC_sw_drift.Rd | 2 +- man/PEC_sw_exposit_drainage.Rd | 14 +++---- man/PEC_sw_exposit_runoff.Rd | 14 +++---- man/PEC_sw_focus.Rd | 28 ++++++------- man/SFO_actual_twa.Rd | 4 +- man/SSLRC_mobility_classification.Rd | 14 +++---- man/TOXSWA_cwa.Rd | 6 +-- man/TSCF.Rd | 2 +- man/endpoint.Rd | 12 +++--- man/max_twa.Rd | 8 ++-- man/perc_runoff_exposit.Rd | 18 ++++---- man/perc_runoff_reduction_exposit.Rd | 14 +++---- man/soil_scenario_data_EFSA_2015.Rd | 18 ++++---- man/soil_scenario_data_EFSA_2017.Rd | 18 ++++---- 46 files changed, 290 insertions(+), 271 deletions(-) (limited to 'docs/reference/PEC_sw_drift.html') diff --git a/DESCRIPTION b/DESCRIPTION index a12f90b..a159c56 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -27,4 +27,5 @@ LazyLoad: yes LazyData: yes Encoding: UTF-8 URL: https://pkgdown.jrwb.de/pfm, https://github.com/jranke/pfm +Roxygen: list(markdown = TRUE, r6 = TRUE) RoxygenNote: 7.2.3 diff --git a/docs/pkgdown.yml b/docs/pkgdown.yml index eeed6da..6571239 100644 --- a/docs/pkgdown.yml +++ b/docs/pkgdown.yml @@ -2,7 +2,7 @@ pandoc: 2.17.1.1 pkgdown: 2.0.7 pkgdown_sha: ~ articles: {} -last_built: 2023-11-12T20:34Z +last_built: 2023-11-12T20:59Z urls: reference: https://pkgdown.jrwb.de/pfm/reference article: https://pkgdown.jrwb.de/pfm/articles diff --git a/docs/reference/EFSA_washoff_2017.html b/docs/reference/EFSA_washoff_2017.html index 1e292af..b424de9 100644 --- a/docs/reference/EFSA_washoff_2017.html +++ b/docs/reference/EFSA_washoff_2017.html @@ -54,10 +54,10 @@

Source

European Food Safety Authority (2017) EFSA guidance document for - predicting environmental concentrations of active substances of plant - protection products and transformation products of these active substances - in soil. EFSA Journal 15(10) 4982 - doi:10.2903/j.efsa.2017.4982

+predicting environmental concentrations of active substances of plant +protection products and transformation products of these active substances +in soil. EFSA Journal 15(10) 4982 +doi:10.2903/j.efsa.2017.4982

diff --git a/docs/reference/FOCUS_GW_scenarios_2012.html b/docs/reference/FOCUS_GW_scenarios_2012.html index 84c2fac..2e9982b 100644 --- a/docs/reference/FOCUS_GW_scenarios_2012.html +++ b/docs/reference/FOCUS_GW_scenarios_2012.html @@ -1,6 +1,6 @@ -A very small subset of the FOCUS Groundwater scenario definitions — FOCUS_GW_scenarios_2012 • pfmA very small subset of the FOCUS Groundwater scenario definitions — FOCUS_GW_scenarios_2012 • pfmProperties of the predefined scenarios from the EFSA guidance from 2015 — soil_scenario_data_EFSA_2015 • pfmProperties of the predefined scenarios from the EFSA guidance from 2017 — soil_scenario_data_EFSA_2017 • pfmProperties of the predefined scenarios from the EFSA guidance from 2017 — soil_scenario_data_EFSA_2017 • pfm