From a6c13f70f6c6669a8088827a602ac475fdf9b624 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Sun, 29 Jan 2017 16:58:53 +0100 Subject: Setting up PELMO runs, execution and evaluation It all works! --- docs/reference/PELMO_runs.html | 144 +++++++++++++++++++++++++++++++++++++++++ 1 file changed, 144 insertions(+) create mode 100644 docs/reference/PELMO_runs.html (limited to 'docs/reference/PELMO_runs.html') diff --git a/docs/reference/PELMO_runs.html b/docs/reference/PELMO_runs.html new file mode 100644 index 0000000..e872196 --- /dev/null +++ b/docs/reference/PELMO_runs.html @@ -0,0 +1,144 @@ + + + + + + + + +Set up runs for FOCUS PELMO — PELMO_runs • pfm + + + + + + + + + + + + + + + + + + + + + + + + +
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Set up runs for FOCUS PELMO

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Per default, the runs are also executed with FOCUS PELMO, and the results are processed +and returned. Currently, only FOCUS PELMO as installed on Linux (or other Unix systems) +using the install_PELMO from the PELMO.installeR package +maintained on github is supported. In such installations, FOCUS PELMO is installed into +package installation directory of PELMO.installeR and run with wine.

+ + + 
PELMO_runs(runs, psm_dir = ".", version = "5.5.3", PELMO_base = "auto",
+  execute = TRUE, cores = getOption("mc.cores", 2L), evaluate = TRUE,
+  overwrite = FALSE)
+
+run_PELMO(runs, version = "5.5.3", PELMO_base = "auto",
+  cores = getOption("mc.cores", 2L))
+
+evaluate_PELMO(runs, version = "5.5.3", PELMO_base = "auto")
+ +

Arguments

+
+
runs
+
A list of lists. Each inner lists has an element named 'psm' +that holds the psm string, and elements named using three letter crop acronyms, +as used in FOCUS_PELMO_crops, +that hold character vectors of three letter scenario acronyms +as used in FOCUS_GW_scenarios_2012.
+
psm_dir
+
The directory where the psm files are located
+
version
+
The FOCUS PELMO version
+
PELMO_base
+
Where the FOCUS PELMO installation is located
+
execute
+
Should PELMO be executed directly?
+
cores
+
The number of cores to execute PELMO runs in parallel
+
evaluate
+
Should the results be returned?
+
overwrite
+
Should an existing run directories be overwritten
+
+ +

References

+ +

PELMO.installeR https://jranke.github.io/PELMO.installeR

+

Wine https://winehq.org

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+ + +
+ + + -- cgit v1.2.1