From b935273d651301b271e0cb66bf36c2bbc1d15b32 Mon Sep 17 00:00:00 2001
From: Johannes Ranke <jranke@uni-bremen.de>
Date: Thu, 31 Jan 2019 01:40:24 +0100
Subject: Separate out PELMO utilities into rPELMO

---
 inst/testdata/FOCUS_PELMO.tar.bz2                  | Bin 5479274 -> 0 bytes
 inst/testdata/FOCUS_Summary_Pesticide_D.txt        |  16 -
 ...ary_Pesticide_D_1_May_every_other_year_mets.txt |  56 ----
 ...y_Pesticide_D_1_day_pre_em_every_third_year.txt |  17 --
 inst/testdata/Pesticide_D.psm                      |  68 -----
 .../Pesticide_D_1_May_every_other_year_mets.psm    | 336 ---------------------
 .../Pesticide_D_1_day_pre_em_every_third_year.psm  |  64 ----
 7 files changed, 557 deletions(-)
 delete mode 100644 inst/testdata/FOCUS_PELMO.tar.bz2
 delete mode 100644 inst/testdata/FOCUS_Summary_Pesticide_D.txt
 delete mode 100644 inst/testdata/FOCUS_Summary_Pesticide_D_1_May_every_other_year_mets.txt
 delete mode 100644 inst/testdata/FOCUS_Summary_Pesticide_D_1_day_pre_em_every_third_year.txt
 delete mode 100644 inst/testdata/Pesticide_D.psm
 delete mode 100644 inst/testdata/Pesticide_D_1_May_every_other_year_mets.psm
 delete mode 100644 inst/testdata/Pesticide_D_1_day_pre_em_every_third_year.psm

(limited to 'inst')

diff --git a/inst/testdata/FOCUS_PELMO.tar.bz2 b/inst/testdata/FOCUS_PELMO.tar.bz2
deleted file mode 100644
index 2288377..0000000
Binary files a/inst/testdata/FOCUS_PELMO.tar.bz2 and /dev/null differ
diff --git a/inst/testdata/FOCUS_Summary_Pesticide_D.txt b/inst/testdata/FOCUS_Summary_Pesticide_D.txt
deleted file mode 100644
index 98e553a..0000000
--- a/inst/testdata/FOCUS_Summary_Pesticide_D.txt
+++ /dev/null
@@ -1,16 +0,0 @@
-FOCUS Summary Output File
-
-Model Version:          	FOCUSPELMO 5.5.3
-Date of this simulation:	27/01/2017 09:43:44
-Pesticide input file:   	Pesticide_D
-Simulated crop:         	Beans (field)
-
-
-Results for ACTIVE SUBSTANCE (FOCUS DUMMY D)
-----------------------------------------------------------------------------------
- Location        	Selected	Flux	    Percolate	Conc.
-                 	Period  	(g/ha)	       (L/m²)	(µg/L)  
-----------------------------------------------------------------------------------
-Porto (O)        	(14/10)	   0.8200000	     1456.40	0.060
-
-
diff --git a/inst/testdata/FOCUS_Summary_Pesticide_D_1_May_every_other_year_mets.txt b/inst/testdata/FOCUS_Summary_Pesticide_D_1_May_every_other_year_mets.txt
deleted file mode 100644
index e91280f..0000000
--- a/inst/testdata/FOCUS_Summary_Pesticide_D_1_May_every_other_year_mets.txt
+++ /dev/null
@@ -1,56 +0,0 @@
-FOCUS Summary Output File
-
-Model Version:          	FOCUSPELMO 5.5.3
-Date of this simulation:	30/01/2017 11:58:56
-Pesticide input file:   	Pesticide_D_1_May_every_other_year_mets
-Simulated crop:         	Winter cereals
-
-
-Results for ACTIVE SUBSTANCE (FOCUS DUMMY D)
-----------------------------------------------------------------------------------
- Location        	Selected	Flux	    Percolate	Conc.
-                 	Period  	(g/ha)	       (L/m²)	(µg/L)  
-----------------------------------------------------------------------------------
-Châteaudun (C)   	(5/2)	   0.0076020	     755.800	0.001
-Hamburg (H)      	(14/8)	   0.4207500	     754.060	0.054
-Jokioinen (J)    	(20/13)	   0.1890400	     946.800	0.020
-Kremsmünster (K) 	(4/13)	   1.6206000	     1548.00	0.103
-Okehampton (N)   	(13/10)	   3.2516000	     2074.00	0.155
-Piacenza (P)     	(20/2)	   1.4134000	     1872.10	0.075
-Porto (O)        	(7/16)	   0.5583300	     2771.20	0.020
-Sevilla (S)      	(15/5)	    6.22E-06	     698.500	0.000
-Thiva (T)        	(4/13)	    2.92E-05	     505.000	0.000
-
-
-Results for METABOLITE A1 (M1)
-----------------------------------------------------------------------------------
- Location        	Selected	Flux	    Percolate	Conc.
-                 	Period  	(g/ha)	       (L/m²)	(µg/L)  
-----------------------------------------------------------------------------------
-Châteaudun (C)   	(19/10)	     376.890	     298.880	126.195
-Hamburg (H)      	(6/12)	     741.850	     909.600	82.196
-Jokioinen (J)    	(17/11)	     498.105	     419.264	121.587
-Kremsmünster (K) 	(6/15)	     816.900	     1080.90	75.494
-Okehampton (N)   	(12/15)	     803.350	     1584.90	50.701
-Piacenza (P)     	(7/9)	     671.640	     845.790	81.586
-Porto (O)        	(13/4)	     634.590	     1862.00	34.154
-Sevilla (S)      	(13/14)	     170.990	     407.560	42.927
-Thiva (T)        	(17/14)	     488.450	     524.740	93.130
-
-
-Results for METABOLITE B1 (M2)
-----------------------------------------------------------------------------------
- Location        	Selected	Flux	    Percolate	Conc.
-                 	Period  	(g/ha)	       (L/m²)	(µg/L)  
-----------------------------------------------------------------------------------
-Châteaudun (C)   	(8/5)	    2.08E-05	     427.990	0.000
-Hamburg (H)      	(14/1)	   0.0092500	     774.100	0.001
-Jokioinen (J)    	(7/20)	    2.42E-04	     328.708	0.000
-Kremsmünster (K) 	(2/4)	   0.0092750	     1806.60	0.001
-Okehampton (N)   	(13/3)	   0.0177690	     2045.00	0.001
-Piacenza (P)     	(15/16)	   0.0084520	     977.900	0.001
-Porto (O)        	(16/15)	   0.0020349	     3013.00	0.000
-Sevilla (S)      	(11/5)	    1.77E-08	     881.300	0.000
-Thiva (T)        	(3/15)	    1.67E-07	     509.100	0.000
-
-
diff --git a/inst/testdata/FOCUS_Summary_Pesticide_D_1_day_pre_em_every_third_year.txt b/inst/testdata/FOCUS_Summary_Pesticide_D_1_day_pre_em_every_third_year.txt
deleted file mode 100644
index 65e05dd..0000000
--- a/inst/testdata/FOCUS_Summary_Pesticide_D_1_day_pre_em_every_third_year.txt
+++ /dev/null
@@ -1,17 +0,0 @@
-FOCUS Summary Output File
-
-Model Version:          	FOCUSPELMO 5.5.3
-Date of this simulation:	25/01/2017 10:20:17
-Pesticide input file:   	Pesticide_D_1_day_pre_em_every_third_year
-Simulated crop:         	Potatoes
-
-
-Results for ACTIVE SUBSTANCE (FOCUS DUMMY D)
-----------------------------------------------------------------------------------
- Location        	Selected	Flux	    Percolate	Conc.
-                 	Period  	(g/ha)	       (L/m²)	(µg/L)  
-----------------------------------------------------------------------------------
-Châteaudun (C)   	(2/8)	   0.1683410	     1767.00	0.010
-Hamburg (H)      	(15/16)	   0.2991540	     2136.80	0.014
-
-
diff --git a/inst/testdata/Pesticide_D.psm b/inst/testdata/Pesticide_D.psm
deleted file mode 100644
index 8204f3c..0000000
--- a/inst/testdata/Pesticide_D.psm
+++ /dev/null
@@ -1,68 +0,0 @@
-<COMMENT>
-Pesticide D, 1 day before emergence     <FOCUS DUMMY D>
-<END COMMENT>
-<NUMBER OF SOIL HORIZONS>
- 0 
-<END NUMBER OF SOIL HORIZONS>
-<APPLICATION>
- 1    0    9    <number of locations absolute app/relative app>
-026            <number of application location>
--01  00  01   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  02   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  03   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  04   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  05   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  06   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  07   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  08   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  09   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  10   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  11   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  12   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  13   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  14   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  15   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  16   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  17   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  18   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  19   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  20   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  21   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  22   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  23   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  24   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  25   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  26   1    0    0    0    0   <day month year app_rate app_depth frpex time>
- 1    <pesticide appl. flag: 1=soil 2 =linear 3=exp. foliar 4=manually
-<END APPLICATION>
-<FLAGS>
- 1   1   <henry(0=direct 1=calc.)  kd_flag(0=direct 1=calc.)>
-<END FLAGS>
-<VOLATILIZATION>
-<henry       solub.      molmass     vap.press   diff air    depth volat.  Hv        Temperature>
-  3.33E-04   90    300     1.00E-04   0.0498    0.1    98400    20 
-  6.67E-10   180    300     4.00E-04   0.0498    0.1    98400    30 
-<END VOLATILIZATION>
-<PLANT UPTAKE>
- 0.5      <plant uptake factor
-<END PLANT UPTAKE>
-<DEGRADATION>
-<degrate    degtemp     q10         moist-abs   moist-rel   moist-exp   rel deg neq sites
-  0.00E+00   0           0           0           0           0         0        <Met A1>
-  0.00E+00   20          2           19          0           0         0        <Met B1>
-  0.00E+00   20          2           19          0           0         0        <Met C1>
-  0.00E+00   20          2           19          0           0         0        <Met D1>
- 0.0346570   20          2.2         0           100         0.7       0        <BR/CO2>
- 0                 <0 = degradation according to degradation factors, 1 = constant with depth,2 individual,3 = degradation according to degradation factors, 4 = constant with depth,5 individual, >2 deg in liquid phase only)
-<PHOTODEGRADATION>
-<rate 1/n>  <I_Ref W/m²>
- 0   500  0   0  0   0  0   0  0   0 
-<END DEGRADATION>
-<ADSORPTION>
-<Koc-value    Fr.exp.Koc  pH          pKa     limit for Freundl.  ann.incr.> <k_doc> <% change> KOC2      pH2 f_neq       kdes>
- 60          0.9        -99          20          0                0      0     1    -99    -99     0     0 
-<END ADSORPTION>
-<DEPTH DEPENDENT SORPTION AND TRANSFORMATION VALUES>
-<Kd          Fr.exp.     Met A1   Met B1   Met C1   Met D1   BR/CO2 >
-<END DEPTH DEPENDENT>
-<END PSM>
diff --git a/inst/testdata/Pesticide_D_1_May_every_other_year_mets.psm b/inst/testdata/Pesticide_D_1_May_every_other_year_mets.psm
deleted file mode 100644
index cf91533..0000000
--- a/inst/testdata/Pesticide_D_1_May_every_other_year_mets.psm
+++ /dev/null
@@ -1,336 +0,0 @@
-<COMMENT>
-Pesticide D, 1 May C H every other year     <FOCUS DUMMY D>
-<END COMMENT>
-<NUMBER OF SOIL HORIZONS>
- 0 
-<END NUMBER OF SOIL HORIZONS>
-<APPLICATION>
- 10    0    0    <number of locations absolute app/relative app>
-022            <number of application location>
-01  01  01   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  01  02   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  01  03   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  01  04   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  01  05   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  01  06   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  01  07   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  01  08   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  01  09   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  01  10   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  01  11   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  01  12   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  01  13   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  01  14   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  01  15   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  01  16   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  01  17   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  01  18   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  01  19   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  01  20   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  01  21   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  01  22   0    0    0    0    0   <day month year app_rate app_depth frpex time>
-023         C   <number of application location>
-01  05  01   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  03   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  05   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  07   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  09   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  11   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  13   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  15   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  17   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  19   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  21   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  23   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  25   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  27   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  29   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  31   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  33   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  35   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  37   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  39   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  41   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  43   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  45   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-023         H   <number of application location>
-01  05  01   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  03   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  05   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  07   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  09   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  11   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  13   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  15   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  17   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  19   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  21   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  23   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  25   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  27   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  29   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  31   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  33   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  35   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  37   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  39   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  41   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  43   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  45   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-023         J   <number of application location>
-01  05  01   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  03   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  05   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  07   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  09   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  11   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  13   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  15   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  17   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  19   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  21   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  23   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  25   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  27   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  29   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  31   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  33   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  35   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  37   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  39   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  41   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  43   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  45   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-023         K   <number of application location>
-01  05  01   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  03   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  05   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  07   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  09   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  11   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  13   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  15   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  17   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  19   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  21   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  23   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  25   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  27   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  29   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  31   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  33   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  35   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  37   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  39   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  41   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  43   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  45   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-023         N   <number of application location>
-01  05  01   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  03   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  05   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  07   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  09   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  11   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  13   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  15   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  17   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  19   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  21   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  23   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  25   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  27   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  29   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  31   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  33   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  35   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  37   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  39   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  41   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  43   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  45   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-023         P   <number of application location>
-01  05  01   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  03   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  05   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  07   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  09   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  11   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  13   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  15   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  17   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  19   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  21   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  23   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  25   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  27   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  29   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  31   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  33   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  35   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  37   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  39   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  41   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  43   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  45   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-023         O   <number of application location>
-01  05  01   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  03   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  05   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  07   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  09   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  11   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  13   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  15   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  17   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  19   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  21   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  23   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  25   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  27   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  29   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  31   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  33   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  35   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  37   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  39   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  41   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  43   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  45   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-023         S   <number of application location>
-01  05  01   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  03   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  05   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  07   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  09   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  11   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  13   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  15   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  17   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  19   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  21   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  23   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  25   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  27   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  29   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  31   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  33   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  35   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  37   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  39   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  41   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  43   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  45   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-023         T   <number of application location>
-01  05  01   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  03   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  05   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  07   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  09   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  11   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  13   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  15   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  17   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  19   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  21   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  23   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  25   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  27   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  29   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  31   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  33   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  35   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  37   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  39   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  41   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  43   1    0    0    0    0   <day month year app_rate app_depth frpex time>
-01  05  45   1    0    0    0    0   <day month year app_rate app_depth frpex time>
- 1    <pesticide appl. flag: 1=soil 2 =linear 3=exp. foliar 4=manually
-<END APPLICATION>
-<FLAGS>
- 1   1   <henry(0=direct 1=calc.)  kd_flag(0=direct 1=calc.)>
-<END FLAGS>
-<VOLATILIZATION>
-<henry       solub.      molmass     vap.press   diff air    depth volat.  Hv        Temperature>
-  3.33E-04   90    300     1.00E-04   0.0498    0.1    98400    20 
-  6.67E-10   180    300     4.00E-04   0.0498    0.1    98400    30 
-<END VOLATILIZATION>
-<PLANT UPTAKE>
- 0.5      <plant uptake factor
-<END PLANT UPTAKE>
-<DEGRADATION>
-<degrate    degtemp     q10         moist-abs   moist-rel   moist-exp   rel deg neq sites
- 0.0277260   20          2.2         0           100         0.7       0        <Met A1>
- 0.0069310   20          2.2         0           100         0.7       0        <Met B1>
-  0.00E+00   20          2           19          0           0         0        <Met C1>
-  0.00E+00   20          2           19          0           0         0        <Met D1>
-  0.00E+00   20          2.2         0           100         0.7       0        <BR/CO2>
- 0                 <0 = degradation according to degradation factors, 1 = constant with depth,2 individual,3 = degradation according to degradation factors, 4 = constant with depth,5 individual, >2 deg in liquid phase only)
-<PHOTODEGRADATION>
-<rate 1/n>  <I_Ref W/m²>
- 0   500  0   0  0   0  0   0  0   0 
-<END DEGRADATION>
-<ADSORPTION>
-<Koc-value    Fr.exp.Koc  pH          pKa     limit for Freundl.  ann.incr.> <k_doc> <% change> KOC2      pH2 f_neq       kdes>
- 60          0.9        -99          20          0                0      0     1    -99    -99     0     0 
-<END ADSORPTION>
-<DEPTH DEPENDENT SORPTION AND TRANSFORMATION VALUES>
-<Kd          Fr.exp.     Met A1   Met B1   Met C1   Met D1   BR/CO2 >
-<END DEPTH DEPENDENT>
-###############################################
-<COMMENT>
-METABOLITE A1     M1
-<END COMMENT>
-<FLAGS>
- 1   <kd_flag(0=direct 1=calc.)>
-<END FLAGS>
-<MOLMASS>
- 200 
-<END MOLMASS>
-<PLANT UPTAKE>
- 0      <plant uptake factor>
-<END PLANT UPTAKE>
-<DEGRADATION>
-<degrate    degtemp     q10         moist-abs   moist-rel   moist-exp  <rel deg in neq sites>
-  0.00E+00   20          2.58        0           100         0.7       0        <Met B1>
-  0.00E+00   20          2.58        0           100         0.7       0        <Met A2>
-  0.00E+00   20          2.58        0           100         0.7       0        <Met B2>
- 0.0023100   20          2.2         0           100         0.7       0        <BR/CO2>
- 0                 <0 = degradation according to degradation factors, 1 = constant with depth,2 individual,3 = degradation according to degradation factors, 4 = constant with depth,5 individual, >2 deg in liquid phase only)
-<END DEGRADATION>
-<ADSORPTION>
-<Koc-value    Fr.exp.Koc  pH          pKa     limit for Freundl.  ann.incr.> <k_doc> <% change> KOC2      pH2    f_neq       kdes>
-10          0.9         -99          20         0.01              0      0     1    -99    -99     0     0 
-<END ADSORPTION>
-<DEPTH DEPENDENT SORPTION AND TRANSFORMATION VALUES>
-<Kd          Fr.exp.     Met B1   Met A2   Met B2   BR/CO2 >
-<END DEPTH DEPENDENT>
-###############################################
-<COMMENT>
-METABOLITE B1     M2
-<END COMMENT>
-<FLAGS>
- 1   <kd_flag(0=direct 1=calc.)>
-<END FLAGS>
-<MOLMASS>
- 200 
-<END MOLMASS>
-<PLANT UPTAKE>
- 0      <plant uptake factor>
-<END PLANT UPTAKE>
-<DEGRADATION>
-<degrate    degtemp     q10         moist-abs   moist-rel   moist-exp  <rel deg in neq sites>
-  0.00E+00   20          2.58        0           100         0.7       0        <Met C1>
-  0.00E+00   20          2.58        0           100         0.7       0        <Met B2>
-  0.00E+00   20          2.58        0           100         0.7       0        <Met C2>
- 0.0693150   20          2.2         0           100         0.7       0        <BR/CO2>
- 0                 <0 = degradation according to degradation factors, 1 = constant with depth,2 individual,3 = degradation according to degradation factors, 4 = constant with depth,5 individual, >2 deg in liquid phase only)
-<END DEGRADATION>
-<ADSORPTION>
-<Koc-value    Fr.exp.Koc  pH          pKa     limit for Freundl.  ann.incr.> <k_doc> <% change> KOC2      pH2    f_neq       kdes>
-1000        0.9         -99          20         0.01              0      0     1    -99    -99     0     0 
-<END ADSORPTION>
-<DEPTH DEPENDENT SORPTION AND TRANSFORMATION VALUES>
-<Kd          Fr.exp.     Met C1   Met B2   Met C2   BR/CO2 >
-<END DEPTH DEPENDENT>
-<END PSM>
diff --git a/inst/testdata/Pesticide_D_1_day_pre_em_every_third_year.psm b/inst/testdata/Pesticide_D_1_day_pre_em_every_third_year.psm
deleted file mode 100644
index c6f5945..0000000
--- a/inst/testdata/Pesticide_D_1_day_pre_em_every_third_year.psm
+++ /dev/null
@@ -1,64 +0,0 @@
-<COMMENT>
-Pesticide D, 1 day before emergence     <FOCUS DUMMY D>
-<END COMMENT>
-<NUMBER OF SOIL HORIZONS>
- 0 
-<END NUMBER OF SOIL HORIZONS>
-<APPLICATION>
- 1    0    9    <number of locations absolute app/relative app>
-022            <number of application location>
--01  00  01   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  04   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  07   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  10   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  13   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  16   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  19   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  22   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  25   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  28   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  31   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  34   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  37   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  40   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  43   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  46   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  49   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  52   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  55   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  58   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  61   1    0    0    0    0   <day month year app_rate app_depth frpex time>
--01  00  64   1    0    0    0    0   <day month year app_rate app_depth frpex time>
- 1    <pesticide appl. flag: 1=soil 2 =linear 3=exp. foliar 4=manually
-<END APPLICATION>
-<FLAGS>
- 1   1   <henry(0=direct 1=calc.)  kd_flag(0=direct 1=calc.)>
-<END FLAGS>
-<VOLATILIZATION>
-<henry       solub.      molmass     vap.press   diff air    depth volat.  Hv        Temperature>
-  3.33E-04   90    300     1.00E-04   0.0498    0.1    98400    20 
-  6.67E-10   180    300     4.00E-04   0.0498    0.1    98400    30 
-<END VOLATILIZATION>
-<PLANT UPTAKE>
- 0.5      <plant uptake factor
-<END PLANT UPTAKE>
-<DEGRADATION>
-<degrate    degtemp     q10         moist-abs   moist-rel   moist-exp   rel deg neq sites
-  0.00E+00   0           0           0           0           0         0        <Met A1>
-  0.00E+00   20          2           19          0           0         0        <Met B1>
-  0.00E+00   20          2           19          0           0         0        <Met C1>
-  0.00E+00   20          2           19          0           0         0        <Met D1>
- 0.0346570   20          2.2         0           100         0.7       0        <BR/CO2>
- 0                 <0 = degradation according to degradation factors, 1 = constant with depth,2 individual,3 = degradation according to degradation factors, 4 = constant with depth,5 individual, >2 deg in liquid phase only)
-<PHOTODEGRADATION>
-<rate 1/n>  <I_Ref W/m²>
- 0   500  0   0  0   0  0   0  0   0 
-<END DEGRADATION>
-<ADSORPTION>
-<Koc-value    Fr.exp.Koc  pH          pKa     limit for Freundl.  ann.incr.> <k_doc> <% change> KOC2      pH2 f_neq       kdes>
- 60          0.9        -99          20          0                0      0     1    -99    -99     0     0 
-<END ADSORPTION>
-<DEPTH DEPENDENT SORPTION AND TRANSFORMATION VALUES>
-<Kd          Fr.exp.     Met A1   Met B1   Met C1   Met D1   BR/CO2 >
-<END DEPTH DEPENDENT>
-<END PSM>
-- 
cgit v1.2.1