From b38055278d4a801598ece9d2c93716a9bf67134a Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Fri, 27 Jan 2017 01:00:07 +0100 Subject: Set up FOCUS PELMO runs and run them in parallel - This works on Linux using wine - PELMO runs (including pelmo.inp files) are correctly generated - The PLM files for FOCUS Pesticide_D in the test data archive are correctly reproduced - The data files (including FOCUS groundwater scenario data) are now created and documented in R files --- man/PELMO_runs.Rd | 35 +++++++++++++++++++++++++++++++++++ 1 file changed, 35 insertions(+) create mode 100644 man/PELMO_runs.Rd (limited to 'man/PELMO_runs.Rd') diff --git a/man/PELMO_runs.Rd b/man/PELMO_runs.Rd new file mode 100644 index 0000000..71fe6ef --- /dev/null +++ b/man/PELMO_runs.Rd @@ -0,0 +1,35 @@ +% Generated by roxygen2: do not edit by hand +% Please edit documentation in R/PELMO_runs.R +\name{PELMO_runs} +\alias{PELMO_runs} +\title{Set up runs for FOCUS PELMO} +\usage{ +PELMO_runs(runs, psm_dir = ".", version = "5.5.3", PELMO_base = "auto", + execute = TRUE, cores = getOption("mc.cores", 2L), evaluate = TRUE, + overwrite = FALSE) +} +\arguments{ +\item{runs}{A list of lists. Each inner lists has an element named 'psm' +that holds the psm string, and elements named using three letter crop acronyms, +as used in \code{\link{FOCUS_PELMO_crops}}, +that hold character vectors of three letter scenario acronyms +as used in \code{\link{FOCUS_GW_scenarios_2012}}.} + +\item{psm_dir}{The directory where the psm files are located} + +\item{version}{The FOCUS PELMO version} + +\item{PELMO_base}{Where the FOCUS PELMO installation is located} + +\item{execute}{Should PELMO be executed directly?} + +\item{cores}{The number of cores to execute PELMO runs in parallel} + +\item{evaluate}{Should the results be returned?} + +\item{overwrite}{Should an existing run directories be overwritten} +} +\description{ +Per default, the runs are also executed with FOCUS PELMO, and the results are processed +and returned. +} -- cgit v1.2.1