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authorJohannes Ranke <jranke@uni-bremen.de>2021-11-19 00:18:22 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2021-11-19 00:18:22 +0100
commit0056584e5168df75bca159ddf3469aa07457b77d (patch)
tree12fae625ede19eba2776a3c5e3d9b3d8f9fd41c5 /tests/testthat
parentd032fb8ba7b0827bb896b6d9a07d6449d88cf511 (diff)
Update tests and logs
Diffstat (limited to 'tests/testthat')
-rw-r--r--tests/testthat/test_chent.R2
-rw-r--r--tests/testthat/test_pai.R8
2 files changed, 5 insertions, 5 deletions
diff --git a/tests/testthat/test_chent.R b/tests/testthat/test_chent.R
index 094ff8b..4551cf7 100644
--- a/tests/testthat/test_chent.R
+++ b/tests/testthat/test_chent.R
@@ -2,7 +2,7 @@ context("Generation of chent objects")
# Check if we can use RDKit
skip_if_no_rdkit <- function() {
- if (!chents:::rdkit_available()) skip("RDKit is not available via PythonInR")
+ if (!chents:::rdkit_available) skip("RDKit is not available via reticulate")
}
oct <- chent$new("1-octanol", smiles = "CCCCCCCCO", pubchem = FALSE, chyaml = FALSE)
diff --git a/tests/testthat/test_pai.R b/tests/testthat/test_pai.R
index 368876e..e22b6ae 100644
--- a/tests/testthat/test_pai.R
+++ b/tests/testthat/test_pai.R
@@ -8,12 +8,12 @@ test_that("a pai object is correctly generated from an ambiguous name", {
glyphosate <- pai$new("glyphosate", chyaml = FALSE)
expect_message(pai$new("benzalkonium chloride", chyaml = FALSE), "did not give results")
- expect_equivalent(glyphosate$alanwood$cas, "1071-83-6")
- expect_equivalent(glyphosate$alanwood$formula, "C3H8NO5P")
- expect_equivalent(glyphosate$alanwood$iupac_name, "N-(phosphonomethyl)glycine")
+ expect_equivalent(glyphosate$bcpc$cas, "1071-83-6")
+ expect_equivalent(glyphosate$bcpc$formula, "C3H8NO5P")
+ expect_equivalent(glyphosate$bcpc$iupac_name, "N-(phosphonomethyl)glycine")
expect_equal(names(glyphosate$identifier), "glyphosate")
ik = "XDDAORKBJWWYJS-UHFFFAOYSA-N"
- attr(ik, "source") <- c("alanwood", "pubchem")
+ attr(ik, "source") <- c("bcpc", "pubchem")
expect_equal(glyphosate$inchikey, ik)
expect_equivalent(round(glyphosate$mw, 2), 169.07)
smiles <- "C(C(=O)O)NCP(=O)(O)O"

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