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authorJohannes Ranke <jranke@uni-bremen.de>2018-03-21 18:16:52 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2018-03-21 18:16:52 +0100
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treec8d79386f9f01c8ddfe218435860d997ba6af01a /docs/articles/compiled_models.html
parentb88bc151196d66d876fbc11059fc8cd365ef5534 (diff)
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@@ -80,7 +80,7 @@
<h1>Performance benefit by using compiled model definitions in mkin</h1>
<h4 class="author">Johannes Ranke</h4>
- <h4 class="date">2018-03-11</h4>
+ <h4 class="date">2018-03-21</h4>
</div>
@@ -118,9 +118,9 @@ SFO_SFO &lt;-<span class="st"> </span><span class="kw"><a href="../reference/mki
}</code></pre></div>
<pre><code>## Lade nötiges Paket: rbenchmark</code></pre>
<pre><code>## test replications elapsed relative user.self sys.self
-## 3 deSolve, compiled 3 1.978 1.000 1.976 0
-## 1 deSolve, not compiled 3 13.541 6.846 13.531 0
-## 2 Eigenvalue based 3 2.332 1.179 2.330 0
+## 3 deSolve, compiled 3 2.155 1.000 2.152 0
+## 1 deSolve, not compiled 3 15.124 7.018 15.109 0
+## 2 Eigenvalue based 3 2.576 1.195 2.574 0
## user.child sys.child
## 3 0 0
## 1 0 0
@@ -149,14 +149,14 @@ SFO_SFO &lt;-<span class="st"> </span><span class="kw"><a href="../reference/mki
}</code></pre></div>
<pre><code>## Successfully compiled differential equation model from auto-generated C code.</code></pre>
<pre><code>## test replications elapsed relative user.self sys.self
-## 2 deSolve, compiled 3 3.334 1.000 3.331 0
-## 1 deSolve, not compiled 3 29.917 8.973 29.888 0
+## 2 deSolve, compiled 3 3.419 1.000 3.415 0
+## 1 deSolve, not compiled 3 31.159 9.113 31.130 0
## user.child sys.child
## 2 0 0
## 1 0 0</code></pre>
<p>Here we get a performance benefit of a factor of 9 using the version of the differential equation model compiled from C code!</p>
<p>This vignette was built with mkin 0.9.46.3 on</p>
-<pre><code>## R version 3.4.3 (2017-11-30)
+<pre><code>## R version 3.4.4 (2018-03-15)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: Debian GNU/Linux 9 (stretch)</code></pre>
<pre><code>## CPU model: AMD Ryzen 7 1700 Eight-Core Processor</code></pre>

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