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authorJohannes Ranke <jranke@uni-bremen.de>2016-10-06 08:56:45 +0200
committerJohannes Ranke <jranke@uni-bremen.de>2016-10-06 08:56:45 +0200
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-<!DOCTYPE html>
-<html lang="en">
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-<title>schaefer07_complex_case. mkin 0.9.44.9000</title>
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-
- <h1>
- Metabolism data set used for checking the software quality of KinGUI
-</h1>
-
-<div class="row">
- <div class="span8">
- <h2>Usage</h2>
- <pre><div>data(schaefer07_complex_case)</div></pre>
-
- <div class="Description">
- <h2>Description</h2>
-
- <p>This dataset was used for a comparison of KinGUI and ModelMaker to check the
- software quality of KinGUI in the original publication (Schäfer et al., 2007).
- The results from the fitting are also included.</p>
-
- </div>
-
- <div class="Format">
- <h2>Format</h2>
-
- <p>The data set is a data frame with 8 observations on the following 6 variables.
- <dl>
- <dt><code>time</code></dt><dd>a numeric vector</dd></p>
-
- <p><dt><code>parent</code></dt><dd>a numeric vector</dd></p>
-
- <p><dt><code>A1</code></dt><dd>a numeric vector</dd></p>
-
- <p><dt><code>B1</code></dt><dd>a numeric vector</dd></p>
-
- <p><dt><code>C1</code></dt><dd>a numeric vector</dd></p>
-
- <p><dt><code>A2</code></dt><dd>a numeric vector</dd></p>
-
- <p></dl></p>
-
- <p>The results are a data frame with 14 results for different parameter values</p>
-
- </div>
-
- <div class="References">
- <h2>References</h2>
-
- <p>Schäfer D, Mikolasch B, Rainbird P and Harvey B (2007). KinGUI: a new kinetic
- software tool for evaluations according to FOCUS degradation kinetics. In: Del
- Re AAM, Capri E, Fragoulis G and Trevisan M (Eds.). Proceedings of the XIII
- Symposium Pesticide Chemistry, Piacenza, 2007, p. 916-923.</p>
-
- </div>
-
- <h2 id="examples">Examples</h2>
- <pre class="examples"><div class='input'>data &lt;- mkin_wide_to_long(schaefer07_complex_case, time = &quot;time&quot;)
-model &lt;- mkinmod(
- parent = list(type = &quot;SFO&quot;, to = c(&quot;A1&quot;, &quot;B1&quot;, &quot;C1&quot;), sink = FALSE),
- A1 = list(type = &quot;SFO&quot;, to = &quot;A2&quot;),
- B1 = list(type = &quot;SFO&quot;),
- C1 = list(type = &quot;SFO&quot;),
- A2 = list(type = &quot;SFO&quot;), use_of_ff = &quot;max&quot;)
-</div>
-<strong class='message'>Successfully compiled differential equation model from auto-generated C code.</strong>
-<div class='input'>## Not run: mkinfit(model, data, plot=TRUE)
-</div></pre>
- </div>
- <div class="span4">
- <!-- <ul>
- <li>schaefer07_complex_case</li><li>schaefer07_complex_results</li>
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