diff options
| author | Johannes Ranke <jranke@uni-bremen.de> | 2023-04-15 20:00:00 +0200 |
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2023-04-15 20:00:00 +0200 |
| commit | f215080efba4097ccdaa2d1208edd36c26d7978a (patch) | |
| tree | 1acb432251018d9e51dc4640a186ec7227c70ba3 /inst | |
| parent | 2db19b7657b8f815c65fd4855cacecc91b695c84 (diff) | |
Increase test coverage
Also, using mkin analytical solutions for more than one observed
variable is not supported (but could be if out_values would be
reordered).
Diffstat (limited to 'inst')
| -rw-r--r-- | inst/rmarkdown/templates/hierarchical_kinetics/skeleton/skeleton.Rmd | 16 |
1 files changed, 14 insertions, 2 deletions
diff --git a/inst/rmarkdown/templates/hierarchical_kinetics/skeleton/skeleton.Rmd b/inst/rmarkdown/templates/hierarchical_kinetics/skeleton/skeleton.Rmd index cb328308..71d62677 100644 --- a/inst/rmarkdown/templates/hierarchical_kinetics/skeleton/skeleton.Rmd +++ b/inst/rmarkdown/templates/hierarchical_kinetics/skeleton/skeleton.Rmd @@ -15,7 +15,6 @@ library(mkin) library(knitr) library(saemix) library(parallel) -library(readxl) ``` ```{r n_cores, cache = FALSE} @@ -186,6 +185,13 @@ illparms(parent_best_pH_2) parms(parent_best_pH_2, ci = TRUE) |> kable(digits = 3) ``` +The endpoints corresponding to the median pH in the tested soils +are shown below. + +```{r dependson = "parent-best-pH"} +endpoints(parent_best_pH_2) +``` + ```{r} stopCluster(cl) ``` @@ -280,6 +286,13 @@ plot(path_1_refined) parms(path_1_refined, ci = TRUE) |> kable(digits = 3) ``` +The pathway endpoints corresponding to the median pH in the tested soils +are shown below. + +```{r dependson = "parent-best-pH"} +endpoints(parent_best_pH_2) +``` + ```{r} stopCluster(cl) ``` @@ -324,7 +337,6 @@ tex_listing(path_1_refined, ## Session info ```{r echo = FALSE, cache = FALSE} -parallel::stopCluster(cl) sessionInfo() ``` |