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authorJohannes Ranke <jranke@uni-bremen.de>2022-11-18 10:09:28 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2022-11-18 11:31:49 +0100
commita14237fc1580b09f8772cd3330b0a445785e48ac (patch)
treebd49df2949991e9f53caeb47dba7f8cb1a661615 /log/test.log
parent76deb3739d563068ccd4637afa8933d6ddbc70ef (diff)
Round parameters with signif() before printing
This will hopefully make the test pass on all relevant platforms.
Diffstat (limited to 'log/test.log')
-rw-r--r--log/test.log20
1 files changed, 10 insertions, 10 deletions
diff --git a/log/test.log b/log/test.log
index af8e52fd..87d24690 100644
--- a/log/test.log
+++ b/log/test.log
@@ -1,38 +1,38 @@
ℹ Testing mkin
✔ | F W S OK | Context
✔ | 5 | AIC calculation
-✔ | 5 | Analytical solutions for coupled models [3.2s]
+✔ | 5 | Analytical solutions for coupled models [3.3s]
✔ | 5 | Calculation of Akaike weights
✔ | 3 | Export dataset for reading into CAKE
✔ | 12 | Confidence intervals and p-values [1.0s]
-✔ | 1 12 | Dimethenamid data from 2018 [31.4s]
+✔ | 1 12 | Dimethenamid data from 2018 [31.5s]
────────────────────────────────────────────────────────────────────────────────
Skip ('test_dmta.R:98'): Different backends get consistent results for SFO-SFO3+, dimethenamid data
Reason: Fitting this ODE model with saemix takes about 15 minutes on my system
────────────────────────────────────────────────────────────────────────────────
-✔ | 14 | Error model fitting [4.9s]
+✔ | 14 | Error model fitting [5.0s]
✔ | 5 | Time step normalisation
✔ | 4 | Calculation of FOCUS chi2 error levels [0.6s]
✔ | 14 | Results for FOCUS D established in expertise for UBA (Ranke 2014) [0.8s]
✔ | 4 | Test fitting the decline of metabolites from their maximum [0.4s]
✔ | 1 | Fitting the logistic model [0.2s]
-✔ | 10 | Batch fitting and diagnosing hierarchical kinetic models [23.9s]
+✔ | 10 | Batch fitting and diagnosing hierarchical kinetic models [24.4s]
✔ | 1 12 | Nonlinear mixed-effects models [0.3s]
────────────────────────────────────────────────────────────────────────────────
-Skip ('test_mixed.R:74'): saemix results are reproducible for biphasic fits
+Skip ('test_mixed.R:79'): saemix results are reproducible for biphasic fits
Reason: Fitting with saemix takes around 10 minutes when using deSolve
────────────────────────────────────────────────────────────────────────────────
✔ | 3 | Test dataset classes mkinds and mkindsg
✔ | 10 | Special cases of mkinfit calls [0.5s]
✔ | 3 | mkinfit features [0.7s]
✔ | 8 | mkinmod model generation and printing [0.2s]
-✔ | 3 | Model predictions with mkinpredict [0.4s]
-✔ | 9 | Multistart method for saem.mmkin models [37.0s]
+✔ | 3 | Model predictions with mkinpredict [0.3s]
+✔ | 9 | Multistart method for saem.mmkin models [36.2s]
✔ | 16 | Evaluations according to 2015 NAFTA guidance [2.5s]
✔ | 9 | Nonlinear mixed-effects models with nlme [8.8s]
-✔ | 16 | Plotting [10.1s]
+✔ | 16 | Plotting [10.0s]
✔ | 4 | Residuals extracted from mkinfit models
-✔ | 1 36 | saemix parent models [66.0s]
+✔ | 1 36 | saemix parent models [65.8s]
────────────────────────────────────────────────────────────────────────────────
Skip ('test_saemix_parent.R:143'): We can also use mkin solution methods for saem
Reason: This still takes almost 2.5 minutes although we do not solve ODEs
@@ -47,7 +47,7 @@ Reason: This still takes almost 2.5 minutes although we do not solve ODEs
✔ | 4 | Calculation of maximum time weighted average concentrations (TWAs) [2.2s]
══ Results ═════════════════════════════════════════════════════════════════════
-Duration: 211.3 s
+Duration: 210.4 s
── Skipped tests ──────────────────────────────────────────────────────────────
• Fitting this ODE model with saemix takes about 15 minutes on my system (1)

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