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authorjranke <jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb>2012-07-03 15:46:14 +0000
committerjranke <jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb>2012-07-03 15:46:14 +0000
commit5b28712ad11470293e7ab6746718ab3edcfe966b (patch)
tree4d1b3329e04ca007048317536b5dd596bab29eec /man/mkinfit.Rd
parente832b2255ad18d85e4ea9cc445ee87825a71c3a8 (diff)
- Add rtol argument in order to increase the precision of deSolve based
predictions for complex models - Improve default values for atol and set rtol default to 1e-10 git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@49 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
Diffstat (limited to 'man/mkinfit.Rd')
-rw-r--r--man/mkinfit.Rd10
1 files changed, 7 insertions, 3 deletions
diff --git a/man/mkinfit.Rd b/man/mkinfit.Rd
index 5f70dae9..181da4bd 100644
--- a/man/mkinfit.Rd
+++ b/man/mkinfit.Rd
@@ -17,7 +17,7 @@ mkinfit(mkinmod, observed,
solution_type = "auto",
plot = FALSE, quiet = FALSE, err = NULL, weight = "none",
scaleVar = FALSE,
- atol = 1e-6, n.outtimes,
+ atol = 1e-8, rtol = 1e-10, n.outtimes = 100,
trace_parms, ...)
}
\arguments{
@@ -84,8 +84,12 @@ mkinfit(mkinmod, observed,
to the number of observations.
}
\item{atol}{
- Absolute error tolerance, passed to \code{\link{ode}}. Default is 1e-6 as in
- \code{\link{lsoda}}.
+ Absolute error tolerance, passed to \code{\link{ode}}. Default is 1e-8,
+ lower than in \code{\link{lsoda}}.
+ }
+ \item{rtol}{
+ Absolute error tolerance, passed to \code{\link{ode}}. Default is 1e-10,
+ much lower than in \code{\link{lsoda}}.
}
\item{n.outtimes}{
The length of the dataseries that is produced by the model prediction

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