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authorJohannes Ranke <jranke@uni-bremen.de>2017-12-15 17:25:21 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2017-12-15 17:25:21 +0100
commit87d63e649da5e12409c50cb06d3d2a01e9880759 (patch)
treef9c40d865af0967976fe71c529c676e18a6e46dd
parent4944d7ade227f1dd54c94b6a02c3c849dc1fb8ab (diff)
Improve handling of µ in y axis for plot.TOXSWA_cwa
-rw-r--r--ChangeLog14
-rw-r--r--DESCRIPTION2
-rw-r--r--R/TOXSWA_cwa.R8
-rw-r--r--build.log8
4 files changed, 26 insertions, 6 deletions
diff --git a/ChangeLog b/ChangeLog
index 02a9284..647cc62 100644
--- a/ChangeLog
+++ b/ChangeLog
@@ -1,3 +1,17 @@
+commit 4944d7ade227f1dd54c94b6a02c3c849dc1fb8ab
+Author: Johannes Ranke <jranke@uni-bremen.de>
+Date: 2017-12-14 10:19:43 +0100
+
+ Update copyright date
+
+commit 0e1d517d4d6351f2d43ab8636363e73d8b8cf677
+Author: Johannes Ranke <jranke@uni-bremen.de>
+Date: 2017-11-04 11:48:08 +0100
+
+ Option to thin low TOXSWA PECsw data for plotting
+
+ to reduce the file size of plots e.g. as PDF files
+
commit eb4465035dd44907eae3ea0340221316b7cfca12
Author: Johannes Ranke <jranke@uni-bremen.de>
Date: 2017-11-03 11:18:10 +0100
diff --git a/DESCRIPTION b/DESCRIPTION
index b8c99df..b40c0bc 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -2,7 +2,7 @@ Package: pfm
Type: Package
Title: Utilities for Pesticide Fate Modelling
Version: 0.4-5
-Date: 2017-11-04
+Date: 2017-12-15
Authors@R: person("Johannes Ranke", email = "jranke@uni-bremen.de",
role = c("aut", "cre", "cph"),
comment = c(ORCID = "0000-0003-4371-6538"))
diff --git a/R/TOXSWA_cwa.R b/R/TOXSWA_cwa.R
index 81df85f..eacd58f 100644
--- a/R/TOXSWA_cwa.R
+++ b/R/TOXSWA_cwa.R
@@ -129,7 +129,13 @@ plot.TOXSWA_cwa <- function(x, time_column = c("datetime", "t", "t_firstjan", "t
t_rel_to_max = "Time relative to maximum concentration [days]")
}
if (identical(ylab, "default")) {
- ylab = paste( ifelse(total, "Total concentration", "Concentration"), "[\u03bcg/L]")
+ # Use LateX if the current plotting device is tikz
+ if (names(dev.cur()) == "tikz output") {
+ ylab = paste( ifelse(total, "Total concentration", "Concentration"), "[$\\mu$g/L]")
+ } else {
+ conc_string <- ifelse(total, "Total concentration", "Concentration")
+ ylab = bquote(.(conc_string) ~ group("[", mu*g/L, "]"))
+ }
}
if (add) {
lines(plot_data, xlab = xlab, ylab = ylab, ...)
diff --git a/build.log b/build.log
index 543134b..107b3ae 100644
--- a/build.log
+++ b/build.log
@@ -1,10 +1,10 @@
* checking for file ‘./DESCRIPTION’ ... OK
* preparing ‘pfm’:
* checking DESCRIPTION meta-information ... OK
-Warnung: /tmp/RtmpPy0RQl/Rbuild17321b2b74b/pfm/man/TOXSWA_cwa.Rd:29: unknown macro '\u00B5g'
-Warnung: /tmp/RtmpPy0RQl/Rbuild17321b2b74b/pfm/man/TOXSWA_cwa.Rd:29: unknown macro '\u00B5g'
-Warnung: /tmp/RtmpPy0RQl/Rbuild17321b2b74b/pfm/man/TOXSWA_cwa.Rd:38: unknown macro '\u00B5g'
-Warnung: /tmp/RtmpPy0RQl/Rbuild17321b2b74b/pfm/man/read.TOXSWA_cwa.Rd:33: unknown macro '\u00B5g'
+Warnung: /tmp/Rtmp1wb3oS/Rbuild6f0542d0d193/pfm/man/TOXSWA_cwa.Rd:29: unknown macro '\u00B5g'
+Warnung: /tmp/Rtmp1wb3oS/Rbuild6f0542d0d193/pfm/man/TOXSWA_cwa.Rd:29: unknown macro '\u00B5g'
+Warnung: /tmp/Rtmp1wb3oS/Rbuild6f0542d0d193/pfm/man/TOXSWA_cwa.Rd:38: unknown macro '\u00B5g'
+Warnung: /tmp/Rtmp1wb3oS/Rbuild6f0542d0d193/pfm/man/read.TOXSWA_cwa.Rd:33: unknown macro '\u00B5g'
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* looking to see if a ‘data/datalist’ file should be added

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