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index becfa0c..a1e135b 100644
--- a/docs/reference/PEC_sw_exposit_drainage.html
+++ b/docs/reference/PEC_sw_exposit_drainage.html
@@ -1,10 +1,15 @@
<!DOCTYPE html>
+<<<<<<< HEAD
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+=======
+<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><meta name="description" content='This is a reimplementation of the calculation described in the Exposit 3.02 spreadsheet file,
+>>>>>>> refs/remotes/origin/main
in the worksheet "Konzept Drainage". Although there are four groups of
compounds ("Gefährdungsgruppen"), only one distinction is made in the
calculations, between compounds with low mobility (group 1) and compounds
with modest to high mobility (groups 2, 3 and 4). In this implementation,
the group is derived only from the Koc, if not given explicitly. For
+<<<<<<< HEAD
details, see the discussion of the function arguments below.'><!-- mathjax --><script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/MathJax.js" integrity="sha256-nvJJv9wWKEm88qvoQl9ekL2J+k/RWIsaSScxxlsrv8k=" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/config/TeX-AMS-MML_HTMLorMML.js" integrity="sha256-84DKXVJXs0/F8OTMzX4UR909+jtl4G7SPypPavF+GfA=" crossorigin="anonymous"></script><!--[if lt IE 9]>
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@@ -41,11 +46,58 @@ details, see the discussion of the function arguments below.'><!-- mathjax --><s
<div class="col-md-9 contents">
<div class="page-header">
<h1>Calculate PEC surface water due to drainage as in Exposit 3</h1>
+=======
+details, see the discussion of the function arguments below.'><title>Calculate PEC surface water due to drainage as in Exposit 3 — PEC_sw_exposit_drainage • pfm</title><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.2.2/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.2.2/bootstrap.bundle.min.js"></script><!-- Font Awesome icons --><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/all.min.css" integrity="sha256-mmgLkCYLUQbXn0B1SRqzHar6dCnv9oZFPEC1g1cwlkk=" crossorigin="anonymous"><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/v4-shims.min.css" integrity="sha256-wZjR52fzng1pJHwx4aV2AO3yyTOXrcDW7jBpJtTwVxw=" crossorigin="anonymous"><!-- bootstrap-toc --><script src="https://cdn.jsdelivr.net/gh/afeld/bootstrap-toc@v1.0.1/dist/bootstrap-toc.min.js" integrity="sha256-4veVQbu7//Lk5TSmc7YV48MxtMy98e26cf5MrgZYnwo=" crossorigin="anonymous"></script><!-- headroom.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/headroom.min.js" integrity="sha256-AsUX4SJE1+yuDu5+mAVzJbuYNPHj/WroHuZ8Ir/CkE0=" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/jQuery.headroom.min.js" integrity="sha256-ZX/yNShbjqsohH1k95liqY9Gd8uOiE1S4vZc+9KQ1K4=" crossorigin="anonymous"></script><!-- clipboard.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/2.0.6/clipboard.min.js" integrity="sha256-inc5kl9MA1hkeYUt+EC3BhlIgyp/2jDIyBLS6k3UxPI=" crossorigin="anonymous"></script><!-- search --><script src="https://cdnjs.cloudflare.com/ajax/libs/fuse.js/6.4.6/fuse.js" integrity="sha512-zv6Ywkjyktsohkbp9bb45V6tEMoWhzFzXis+LrMehmJZZSys19Yxf1dopHx7WzIKxr5tK2dVcYmaCk2uqdjF4A==" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/autocomplete.js/0.38.0/autocomplete.jquery.min.js" integrity="sha512-GU9ayf+66Xx2TmpxqJpliWbT5PiGYxpaG8rfnBEk1LL8l1KGkRShhngwdXK1UgqhAzWpZHSiYPc09/NwDQIGyg==" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/mark.js/8.11.1/mark.min.js" integrity="sha512-5CYOlHXGh6QpOFA/TeTylKLWfB3ftPsde7AnmhuitiTX4K5SqCLBeKro6sPS8ilsz1Q4NRx3v8Ko2IBiszzdww==" crossorigin="anonymous"></script><!-- pkgdown --><script src="../pkgdown.js"></script><meta property="og:title" content="Calculate PEC surface water due to drainage as in Exposit 3 — PEC_sw_exposit_drainage"><meta property="og:description" content='This is a reimplementation of the calculation described in the Exposit 3.02 spreadsheet file,
+in the worksheet "Konzept Drainage". Although there are four groups of
+compounds ("Gefährdungsgruppen"), only one distinction is made in the
+calculations, between compounds with low mobility (group 1) and compounds
+with modest to high mobility (groups 2, 3 and 4). In this implementation,
+the group is derived only from the Koc, if not given explicitly. For
+details, see the discussion of the function arguments below.'><!-- mathjax --><script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/MathJax.js" integrity="sha256-nvJJv9wWKEm88qvoQl9ekL2J+k/RWIsaSScxxlsrv8k=" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/config/TeX-AMS-MML_HTMLorMML.js" integrity="sha256-84DKXVJXs0/F8OTMzX4UR909+jtl4G7SPypPavF+GfA=" crossorigin="anonymous"></script><!--[if lt IE 9]>
+<script src="https://oss.maxcdn.com/html5shiv/3.7.3/html5shiv.min.js"></script>
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+<![endif]--></head><body>
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+
+
+ <nav class="navbar fixed-top navbar-light navbar-expand-lg bg-light"><div class="container">
+
+ <a class="navbar-brand me-2" href="../index.html">pfm</a>
+
+ <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.6.0</small>
+
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+ <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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+</li>
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+ <input type="search" class="form-control me-sm-2" aria-label="Toggle navigation" name="search-input" data-search-index="../search.json" id="search-input" placeholder="Search for" autocomplete="off"></form>
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+ </a>
+</li>
+ </ul></div>
+
+>>>>>>> refs/remotes/origin/main
- <div class="hidden name"><code>PEC_sw_exposit_drainage.Rd</code></div>
+ </div>
+</nav><div class="container template-reference-topic">
+<div class="row">
+ <main id="main" class="col-md-9"><div class="page-header">
+ <img src="" class="logo" alt=""><h1>Calculate PEC surface water due to drainage as in Exposit 3</h1>
+ <small class="dont-index">Source: <a href="https://github.com/jranke/pfm/blob/HEAD/R/PEC_sw_exposit_runoff.R" class="external-link"><code>R/PEC_sw_exposit_runoff.R</code></a></small>
+ <div class="d-none name"><code>PEC_sw_exposit_drainage.Rd</code></div>
</div>
- <div class="ref-description">
+ <div class="ref-description section level2">
<p>This is a reimplementation of the calculation described in the Exposit 3.02 spreadsheet file,
in the worksheet "Konzept Drainage". Although there are four groups of
compounds ("Gefährdungsgruppen"), only one distinction is made in the
@@ -55,7 +107,12 @@ the group is derived only from the Koc, if not given explicitly. For
details, see the discussion of the function arguments below.</p>
</div>
+<<<<<<< HEAD
<div id="ref-usage">
+=======
+ <div class="section level2">
+ <h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
+>>>>>>> refs/remotes/origin/main
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">PEC_sw_exposit_drainage</span><span class="op">(</span></span>
<span> <span class="va">rate</span>,</span>
<span> interception <span class="op">=</span> <span class="fl">0</span>,</span>
@@ -69,6 +126,7 @@ details, see the discussion of the function arguments below.</p>
<span><span class="op">)</span></span></code></pre></div>
</div>
+<<<<<<< HEAD
<div id="source">
<h2>Source</h2>
<p>Excel 3.02 spreadsheet available from
@@ -76,6 +134,15 @@ details, see the discussion of the function arguments below.</p>
</div>
<div id="arguments">
<h2>Arguments</h2>
+=======
+ <div class="section level2">
+ <h2 id="source">Source<a class="anchor" aria-label="anchor" href="#source"></a></h2>
+ <p>Excel 3.02 spreadsheet available from
+<a href="https://www.bvl.bund.de/DE/04_Pflanzenschutzmittel/03_Antragsteller/04_Zulassungsverfahren/07_Naturhaushalt/psm_naturhaush_node.html#doc1400590bodyText3" class="external-link">https://www.bvl.bund.de/DE/04_Pflanzenschutzmittel/03_Antragsteller/04_Zulassungsverfahren/07_Naturhaushalt/psm_naturhaush_node.html#doc1400590bodyText3</a></p>
+ </div>
+ <div class="section level2">
+ <h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
+>>>>>>> refs/remotes/origin/main
<dl><dt>rate</dt>
<dd><p>The application rate in g/ha</p></dd>
@@ -87,6 +154,7 @@ details, see the discussion of the function arguments below.</p>
<dt>Koc</dt>
<dd><p>The sorption coefficient to soil organic carbon used to determine the mobility. A trigger
value of 550 L/kg is used in order to decide if Koc &gt;&gt; 500.</p></dd>
+<<<<<<< HEAD
<dt>mobility</dt>
@@ -139,6 +207,58 @@ autumn/winter/early spring.</p></dd>
<div id="ref-examples">
<h2>Examples</h2>
+=======
+
+
+<dt>mobility</dt>
+<dd><p>Overrides what is determined from the Koc.</p></dd>
+
+
+<dt>DT50</dt>
+<dd><p>The soil half-life in days</p></dd>
+
+
+<dt>t_drainage</dt>
+<dd><p>The time between application and the drainage event, where degradation occurs, in days</p></dd>
+
+
+<dt>V_ditch</dt>
+<dd><p>The volume of the ditch is assumed to be 1 m * 100 m * 30 cm = 30 m3</p></dd>
+
+
+<dt>V_drainage</dt>
+<dd><p>The drainage volume, equivalent to 1 mm precipitation on 1 ha for spring/summer or 10 mm for
+autumn/winter/early spring.</p></dd>
+
+
+<dt>dilution</dt>
+<dd><p>The dilution factor</p></dd>
+
+</dl></div>
+ <div class="section level2">
+ <h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
+
+
+<p>A list containing the following components</p><dl><dt>perc_runoff</dt>
+<dd><p>The runoff percentages for dissolved and bound substance</p></dd>
+
+<dt>runoff</dt>
+<dd><p>A matrix containing dissolved and bound input for the different distances</p></dd>
+
+<dt>PEC_sw_runoff</dt>
+<dd><p>A matrix containing PEC values for dissolved and bound substance
+for the different distances. If the rate was given in g/ha, the PECsw are in microg/L.</p></dd>
+
+
+</dl></div>
+ <div class="section level2">
+ <h2 id="see-also">See also<a class="anchor" aria-label="anchor" href="#see-also"></a></h2>
+ <div class="dont-index"><p><code><a href="perc_runoff_exposit.html">perc_runoff_exposit</a></code> for runoff loss percentages and <code><a href="perc_runoff_reduction_exposit.html">perc_runoff_reduction_exposit</a></code> for runoff reduction percentages used</p></div>
+ </div>
+
+ <div class="section level2">
+ <h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
+>>>>>>> refs/remotes/origin/main
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span> <span class="fu">PEC_sw_exposit_drainage</span><span class="op">(</span><span class="fl">500</span>, Koc <span class="op">=</span> <span class="fl">150</span><span class="op">)</span></span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> $perc_drainage_total</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> spring autumn </span>
@@ -154,6 +274,7 @@ autumn/winter/early spring.</p></dd>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
</code></pre></div>
</div>
+<<<<<<< HEAD
</div>
<div class="col-md-3 hidden-xs hidden-sm" id="pkgdown-sidebar">
<nav id="toc" data-toggle="toc" class="sticky-top"><h2 data-toc-skip>Contents</h2>
@@ -170,11 +291,30 @@ autumn/winter/early spring.</p></dd>
</div>
</footer></div>
+=======
+ </main><aside class="col-md-3"><nav id="toc"><h2>On this page</h2>
+ </nav></aside></div>
+
+
+ <footer><div class="pkgdown-footer-left">
+ <p></p><p>Developed by Johannes Ranke.</p>
+</div>
+
+<div class="pkgdown-footer-right">
+ <p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.7.</p>
+</div>
+
+ </footer></div>
+>>>>>>> refs/remotes/origin/main
+
+<<<<<<< HEAD
+=======
+>>>>>>> refs/remotes/origin/main
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