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diff --git a/docs/soil_scenario_data_EFSA_2015.html b/docs/soil_scenario_data_EFSA_2015.html new file mode 100644 index 0000000..405e5b0 --- /dev/null +++ b/docs/soil_scenario_data_EFSA_2015.html @@ -0,0 +1,144 @@ +<!DOCTYPE html> +<html lang="en"> + <head> + <meta charset="utf-8"> +<title>soil_scenario_data_EFSA_2015. pfm 0.3-8</title> +<meta name="viewport" content="width=device-width, initial-scale=1.0"> +<meta name="author" content=""> + +<link href="css/bootstrap.css" rel="stylesheet"> +<link href="css/bootstrap-responsive.css" rel="stylesheet"> +<link href="css/highlight.css" rel="stylesheet"> +<link href="css/staticdocs.css" rel="stylesheet"> + +<!--[if lt IE 9]> + <script src="http://html5shim.googlecode.com/svn/trunk/html5.js"></script> +<![endif]--> + +<script type="text/x-mathjax-config"> + MathJax.Hub.Config({ + tex2jax: { + inlineMath: [ ['$','$'], ["\\(","\\)"] ], + processEscapes: true + } + }); +</script> +<script type="text/javascript" + src="http://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"> +</script> + </head> + + <body> + <div class="navbar"> + <div class="navbar-inner"> + <div class="container"> + <a class="brand" href="index.html">pfm 0.3-8</a> + <div class="nav"> + <ul class="nav"> + <li><a href="index.html">Home</a></li> + <li><a href="reference.html">Reference</a></li> + </ul> + </div> + </div> + </div> +</div> + + + <div class="container"> + <header> + + </header> + + <h1>Properties of the predefined scenarios from the EFSA guidance from 2015</h1> + +<div class="row"> + <div class="span8"> + + <div class="Format"> + <h2>Format</h2> + + <p>A data frame with one row for each scenario. Row names are the scenario codes, + e.g. CTN for the Northern scenario for the total concentration in soil. Columns are + mostly self-explanatory. <code>rho</code> is the dry bulk density of the top soil.</p> + + </div> + + <div class="Source"> + <h2>Source</h2> + + <p>EFSA (European Food Safety Authority) (2015) +EFSA guidance document for predicting environmental concentrations +of active substances of plant protection products and transformation products of these +active substances in soil. <em>EFSA Journal</em> <b>13</b>(4) 4093 +doi:10.2903/j.efsa.2015.4093</p> + + </div> + + <div class="Description"> + <h2>Description</h2> + + <p>Properties of the predefined scenarios used at Tier 1, Tier 2A and Tier 3A for the +concentration in soil as given in the EFSA guidance (2015, p. 13/14). Also, the +scenario and model adjustment factors from p. 15 and p. 17 are included.</p> + + </div> + + <h2 id="examples">Examples</h2> + <pre class="examples"><div class='input'><span class="comment">## Not run: ------------------------------------</span> +<span class="comment"># # This is the code that was used to define the data</span> +<span class="comment"># soil_scenario_data_EFSA_2015 <- data.frame(</span> +<span class="comment"># Zone = rep(c("North", "Central", "South"), 2),</span> +<span class="comment"># Country = c("Estonia", "Germany", "France", "Denmark", "Czech Republik", "Spain"),</span> +<span class="comment"># T_arit = c(4.7, 8.0, 11.0, 8.2, 9.1, 12.8),</span> +<span class="comment"># T_arr = c(7.0, 10.1, 12.3, 9.8, 11.2, 14.7),</span> +<span class="comment"># Texture = c("Coarse", "Coarse", "Medium fine", "Medium", "Medium", "Medium"),</span> +<span class="comment"># f_om = c(0.118, 0.086, 0.048, 0.023, 0.018, 0.011),</span> +<span class="comment"># theta_fc = c(0.244, 0.244, 0.385, 0.347, 0.347, 0.347),</span> +<span class="comment"># rho = c(0.95, 1.05, 1.22, 1.39, 1.43, 1.51),</span> +<span class="comment"># f_sce = c(3, 2, 2, 2, 1.5, 1.5),</span> +<span class="comment"># f_mod = c(2, 2, 2, 4, 4, 4),</span> +<span class="comment"># stringsAsFactors = FALSE,</span> +<span class="comment"># row.names = c("CTN", "CTC", "CTS", "CLN", "CLC", "CLS")</span> +<span class="comment"># )</span> +<span class="comment"># save(soil_scenario_data_EFSA_2015, file = '../data/soil_scenario_data_EFSA_2015.RData')</span> +<span class="comment">## ---------------------------------------------</span> + +<span class="comment"># And this is the resulting dataframe</span> +<span class="symbol">soil_scenario_data_EFSA_2015</span></div> +<div class='output'> Zone Country T_arit T_arr Texture f_om theta_fc rho f_sce +CTN North Estonia 4.7 7.0 Coarse 0.118 0.244 0.95 3.0 +CTC Central Germany 8.0 10.1 Coarse 0.086 0.244 1.05 2.0 +CTS South France 11.0 12.3 Medium fine 0.048 0.385 1.22 2.0 +CLN North Denmark 8.2 9.8 Medium 0.023 0.347 1.39 2.0 +CLC Central Czech Republik 9.1 11.2 Medium 0.018 0.347 1.43 1.5 +CLS South Spain 12.8 14.7 Medium 0.011 0.347 1.51 1.5 + f_mod +CTN 2 +CTC 2 +CTS 2 +CLN 4 +CLC 4 +CLS 4 +</div></pre> + </div> + <div class="span4 sidebar"> + <!-- <ul> + <li>soil_scenario_data_EFSA_2015</li> + </ul> + <ul> + <li>datasets</li> + </ul> --> + + + + + </div> +</div> + + <footer> + <p class="pull-right"><a href="#">Back to top</a></p> +<p>Built by <a href="https://github.com/hadley/staticdocs">staticdocs</a>. 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