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authorJohannes Ranke <jranke@uni-bremen.de>2017-03-06 17:00:48 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2017-03-06 17:00:48 +0100
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-<title>calplot. chemCal 0.1-37</title>
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- Johannes Ranke
- &lt;a href='mailto:jranke@uni-bremen.de'&gt;jranke@uni-bremen.de&lt;/a&gt;
- &lt;a href = 'http://www.uft.uni-bremen.de/chemie/ranke'&gt;http://www.uft.uni-bremen.de/chemie/ranke&lt;/a&gt;
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-
- <h1>Plot calibration graphs from univariate linear models</h1>
-
-<div class="row">
- <div class="span8">
- <h2>Usage</h2>
- <pre><span class="functioncall"><a href='calplot.lm.html'>calplot</a></span><span class="keyword">(</span><span class="symbol">object</span><span class="keyword">,</span> <span class="argument">xlim</span>&nbsp;<span class="argument">=</span>&nbsp;<span class="functioncall"><a href='http://www.rdocumentation.org/packages/base/topics/c'>c</a></span><span class="keyword">(</span><span class="string">"auto"</span><span class="keyword">,</span> <span class="string">"auto"</span><span class="keyword">)</span><span class="keyword">,</span> <span class="argument">ylim</span>&nbsp;<span class="argument">=</span>&nbsp;<span class="functioncall"><a href='http://www.rdocumentation.org/packages/base/topics/c'>c</a></span><span class="keyword">(</span><span class="string">"auto"</span><span class="keyword">,</span> <span class="string">"auto"</span><span class="keyword">)</span><span class="keyword">,</span>
- <span class="argument">xlab</span>&nbsp;<span class="argument">=</span>&nbsp;<span class="string">"Concentration"</span><span class="keyword">,</span> <span class="argument">ylab</span>&nbsp;<span class="argument">=</span>&nbsp;<span class="string">"Response"</span><span class="keyword">,</span> <span class="argument">alpha</span><span class="argument">=</span><span class="number">0.05</span><span class="keyword">,</span> <span class="argument">varfunc</span>&nbsp;<span class="argument">=</span>&nbsp;NULL<span class="keyword">)</span></pre>
-
- <h2>Arguments</h2>
- <dl>
- <dt>object</dt>
- <dd>
- A univariate model object of class <code><a href='http://www.rdocumentation.org/packages/stats/topics/lm'>lm</a></code> or
- <code><a href='http://www.rdocumentation.org/packages/MASS/topics/rlm'>rlm</a></code>
- with model formula <code>y ~ x</code> or <code>y ~ x - 1</code>.
- </dd>
- <dt>xlim</dt>
- <dd>
- The limits of the plot on the x axis.
- </dd>
- <dt>ylim</dt>
- <dd>
- The limits of the plot on the y axis.
- </dd>
- <dt>xlab</dt>
- <dd>
- The label of the x axis.
- </dd>
- <dt>ylab</dt>
- <dd>
- The label of the y axis.
- </dd>
- <dt>alpha</dt>
- <dd>
- The error tolerance level for the confidence and prediction bands. Note that this
- includes both tails of the Gaussian distribution, unlike the alpha and beta parameters
- used in <code><a href='lod.html'>lod</a></code> (see note below).
- </dd>
- <dt>varfunc</dt>
- <dd>
- The variance function for generating the weights in the model.
- Currently, this argument is ignored (see note below).
- </dd>
- </dl>
-
- <div class="Description">
- <h2>Description</h2>
-
- <p>Produce graphics of calibration data, the fitted model as well
- as confidence, and, for unweighted regression, prediction bands.</p>
-
- </div>
-
- <div class="Value">
- <h2>Value</h2>
-
- <p><dl>
- A plot of the calibration data, of your fitted model as well as lines showing
- the confidence limits. Prediction limits are only shown for models from
- unweighted regression.
-</dl></p>
-
- </div>
-
- <div class="Note">
- <h2>Note</h2>
-
- <p>Prediction bands for models from weighted linear regression require weights
- for the data, for which responses should be predicted. Prediction intervals
- using weights e.g. from a variance function are currently not supported by
- the internally used function <code><a href='http://www.rdocumentation.org/packages/stats/topics/predict.lm'>predict.lm</a></code>, therefore,
- <code>calplot</code> does not draw prediction bands for such models.</p>
-
- <p>It is possible to compare the <code><a href='calplot.lm.html'>calplot</a></code> prediction bands with the
- <code><a href='lod.html'>lod</a></code> values if the <code>lod()</code> alpha and beta parameters are
- half the value of the <code>calplot()</code> alpha parameter.</p>
-
- <p></p>
-
- </div>
-
- <h2 id="examples">Examples</h2>
- <pre class="examples"><div class='input'><span class="functioncall"><a href='http://www.rdocumentation.org/packages/utils/topics/data'>data</a></span><span class="keyword">(</span><span class="symbol">massart97ex3</span><span class="keyword">)</span>
-<span class="symbol">m</span> <span class="assignement">&lt;-</span> <span class="functioncall"><a href='http://www.rdocumentation.org/packages/stats/topics/lm'>lm</a></span><span class="keyword">(</span><span class="symbol">y</span> <span class="keyword">~</span> <span class="symbol">x</span><span class="keyword">,</span> <span class="argument">data</span> <span class="argument">=</span> <span class="symbol">massart97ex3</span><span class="keyword">)</span>
-<span class="functioncall"><a href='calplot.lm.html'>calplot</a></span><span class="keyword">(</span><span class="symbol">m</span><span class="keyword">)</span></div>
-<p><img src='calplot.lm-2.png' alt='' width='540' height='400' /></p></pre>
- </div>
- <div class="span4 sidebar">
- <!-- <ul>
- <li>calplot</li><li>calplot.default</li><li>calplot.lm</li>
- </ul>
- <ul>
- <li>regression</li>
- </ul> -->
-
-
-
- <h2>Author</h2>
-
- Johannes Ranke
- <a href='mailto:jranke@uni-bremen.de'>jranke@uni-bremen.de</a>
- <a href = 'http://www.uft.uni-bremen.de/chemie/ranke'>http://www.uft.uni-bremen.de/chemie/ranke</a>
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