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-rw-r--r--DESCRIPTION2
-rw-r--r--docs/404.html2
-rw-r--r--docs/articles/chemCal.html8
-rw-r--r--docs/articles/index.html2
-rw-r--r--docs/authors.html2
-rw-r--r--docs/index.html9
-rw-r--r--docs/news/index.html5
-rw-r--r--docs/pkgdown.yml2
-rw-r--r--docs/reference/calplot.lm.html2
-rw-r--r--docs/reference/din32645.html2
-rw-r--r--docs/reference/index.html2
-rw-r--r--docs/reference/inverse.predict.html2
-rw-r--r--docs/reference/lod.html2
-rw-r--r--docs/reference/loq.html2
-rw-r--r--docs/reference/massart97ex1.html2
-rw-r--r--docs/reference/massart97ex3.html2
-rw-r--r--docs/reference/rl95_cadmium.html2
-rw-r--r--docs/reference/rl95_toluene.html2
-rw-r--r--docs/reference/utstats14.html10
19 files changed, 32 insertions, 30 deletions
diff --git a/DESCRIPTION b/DESCRIPTION
index d9fe824..799a81e 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -9,7 +9,7 @@ Suggests: MASS, knitr, testthat, investr, covr, rmarkdown
Description: Simple functions for plotting linear
calibration functions and estimating standard errors for measurements
according to the Handbook of Chemometrics and Qualimetrics: Part A
- by Massart et al. There are also functions estimating the limit
+ by Massart et al. (1997) There are also functions estimating the limit
of detection (LOD) and limit of quantification (LOQ).
The functions work on model objects from - optionally weighted - linear
regression (lm) or robust linear regression ('rlm' from the 'MASS' package).
diff --git a/docs/404.html b/docs/404.html
index 6cbb712..2fb6573 100644
--- a/docs/404.html
+++ b/docs/404.html
@@ -95,7 +95,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
- <a href="http://github.com/jranke/chemCal/">
+ <a href="https://github.com/jranke/chemCal/">
<span class="fab fa-github fa-lg"></span>
</a>
diff --git a/docs/articles/chemCal.html b/docs/articles/chemCal.html
index 9f2ebdb..8d18c3a 100644
--- a/docs/articles/chemCal.html
+++ b/docs/articles/chemCal.html
@@ -55,7 +55,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
- <a href="http://github.com/jranke/chemCal/">
+ <a href="https://github.com/jranke/chemCal/">
<span class="fab fa-github fa-lg"></span>
</a>
@@ -76,9 +76,9 @@
<h1 data-toc-skip>Introduction to chemCal</h1>
<h4 class="author">Johannes Ranke</h4>
- <h4 class="date">2021-04-08</h4>
+ <h4 class="date">2021-04-17</h4>
- <small class="dont-index">Source: <a href="http://github.com/jranke/chemCal/blob/master/vignettes/chemCal.Rmd"><code>vignettes/chemCal.Rmd</code></a></small>
+ <small class="dont-index">Source: <a href="https://github.com/jranke/chemCal/blob/master/vignettes/chemCal.Rmd"><code>vignettes/chemCal.Rmd</code></a></small>
<div class="hidden name"><code>chemCal.Rmd</code></div>
</div>
@@ -100,7 +100,7 @@
<p>When calibrating an analytical method, the first task is to generate a suitable model. If we want to use the <code>chemCal</code> functions, we have to restrict ourselves to univariate, possibly weighted, linear regression so far.</p>
<p>Once such a model has been created, the calibration can be graphically shown by using the <code>calplot</code> function:</p>
<div class="sourceCode" id="cb1"><pre class="downlit sourceCode r">
-<code class="sourceCode R"><span class="kw"><a href="https://rdrr.io/r/base/library.html">library</a></span><span class="op">(</span><span class="va"><a href="https://pkgdown.jrwb.de/chemCal">chemCal</a></span><span class="op">)</span>
+<code class="sourceCode R"><span class="kw"><a href="https://rdrr.io/r/base/library.html">library</a></span><span class="op">(</span><span class="va"><a href="https://pkgdown.jrwb.de/chemCal/">chemCal</a></span><span class="op">)</span>
<span class="va">m0</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/stats/lm.html">lm</a></span><span class="op">(</span><span class="va">y</span> <span class="op">~</span> <span class="va">x</span>, data <span class="op">=</span> <span class="va">massart97ex3</span><span class="op">)</span>
<span class="fu"><a href="../reference/calplot.html">calplot</a></span><span class="op">(</span><span class="va">m0</span><span class="op">)</span></code></pre></div>
<p><img src="chemCal_files/figure-html/unnamed-chunk-1-1.png" width="700"></p>
diff --git a/docs/articles/index.html b/docs/articles/index.html
index 6373471..48a4eca 100644
--- a/docs/articles/index.html
+++ b/docs/articles/index.html
@@ -95,7 +95,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
- <a href="http://github.com/jranke/chemCal/">
+ <a href="https://github.com/jranke/chemCal/">
<span class="fab fa-github fa-lg"></span>
</a>
diff --git a/docs/authors.html b/docs/authors.html
index 1db4904..476cf5e 100644
--- a/docs/authors.html
+++ b/docs/authors.html
@@ -95,7 +95,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
- <a href="http://github.com/jranke/chemCal/">
+ <a href="https://github.com/jranke/chemCal/">
<span class="fab fa-github fa-lg"></span>
</a>
diff --git a/docs/index.html b/docs/index.html
index e954fa0..a724173 100644
--- a/docs/index.html
+++ b/docs/index.html
@@ -15,7 +15,7 @@
<meta property="og:description" content="Simple functions for plotting linear
calibration functions and estimating standard errors for measurements
according to the Handbook of Chemometrics and Qualimetrics: Part A
- by Massart et al. There are also functions estimating the limit
+ by Massart et al. (1997) There are also functions estimating the limit
of detection (LOD) and limit of quantification (LOQ).
The functions work on model objects from - optionally weighted - linear
regression (lm) or robust linear regression (rlm from the MASS package).">
@@ -61,7 +61,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
- <a href="http://github.com/jranke/chemCal/">
+ <a href="https://github.com/jranke/chemCal/">
<span class="fab fa-github fa-lg"></span>
</a>
@@ -93,9 +93,9 @@
<ul class="list-unstyled">
<li>Download from CRAN at <br><a href="https://cloud.r-project.org/package=chemCal">https://​cloud.r-project.org/​package=chemCal</a>
</li>
-<li>Browse source code at <br><a href="http://github.com/jranke/chemCal/">http://​github.com/​jranke/​chemCal/​</a>
+<li>Browse source code at <br><a href="https://github.com/jranke/chemCal/">https://​github.com/​jranke/​chemCal/​</a>
</li>
-<li>Report a bug at <br><a href="http://github.com/jranke/chemCal/issues">http://​github.com/​jranke/​chemCal/​issues</a>
+<li>Report a bug at <br><a href="https://github.com/jranke/chemCal/issues">https://​github.com/​jranke/​chemCal/​issues</a>
</li>
</ul>
</div>
@@ -116,7 +116,6 @@
<h2>Dev status</h2>
<ul class="list-unstyled">
<li><a href="https://cran.r-project.org/package=chemCal"><img src="https://www.r-pkg.org/badges/version/chemCal"></a></li>
-<li><a href="https://www.tidyverse.org/lifecycle/#dormant"><img src="https://img.shields.io/badge/lifecycle-dormant-blue.svg" alt="Lifecycle: dormant"></a></li>
<li><a href="https://travis-ci.com/jranke/chemCal"><img src="https://travis-ci.com/jranke/chemCal.svg?branch=master" alt="Build Status"></a></li>
<li><a href="https://codecov.io/github/jranke/chemCal"><img src="https://codecov.io/github/jranke/chemCal/branch/master/graphs/badge.svg" alt="codecov"></a></li>
</ul>
diff --git a/docs/news/index.html b/docs/news/index.html
index 9ea5e1d..d3ddaa8 100644
--- a/docs/news/index.html
+++ b/docs/news/index.html
@@ -95,7 +95,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
- <a href="http://github.com/jranke/chemCal/">
+ <a href="https://github.com/jranke/chemCal/">
<span class="fab fa-github fa-lg"></span>
</a>
@@ -114,7 +114,7 @@
<div class="col-md-9 contents">
<div class="page-header">
<h1 data-toc-skip>Changelog <small></small></h1>
- <small>Source: <a href='http://github.com/jranke/chemCal/blob/master/NEWS.md'><code>NEWS.md</code></a></small>
+ <small>Source: <a href='https://github.com/jranke/chemCal/blob/master/NEWS.md'><code>NEWS.md</code></a></small>
</div>
<div id="chemcal-022" class="section level1">
@@ -124,6 +124,7 @@
<ul>
<li><p>‘calplot’ gains an argument ‘legend_x’ for better control of the legend position</p></li>
<li><p>Added the cadmium dataset from Rocke and Lorenzato (1995)</p></li>
+<li><p>Suggest: rmarkdown as it is not a dependency of knitr any more, as pointed out by Kurt Hornik</p></li>
</ul>
</div>
<div id="chemcal-021" class="section level1">
diff --git a/docs/pkgdown.yml b/docs/pkgdown.yml
index f4bc8f6..6279661 100644
--- a/docs/pkgdown.yml
+++ b/docs/pkgdown.yml
@@ -3,5 +3,5 @@ pkgdown: 1.6.1
pkgdown_sha: ~
articles:
chemCal: chemCal.html
-last_built: 2021-04-08T05:16Z
+last_built: 2021-04-17T05:19Z
diff --git a/docs/reference/calplot.lm.html b/docs/reference/calplot.lm.html
index fb329f6..b041a8d 100644
--- a/docs/reference/calplot.lm.html
+++ b/docs/reference/calplot.lm.html
@@ -97,7 +97,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
- <a href="http://github.com/jranke/chemCal/">
+ <a href="https://github.com/jranke/chemCal/">
<span class="fab fa-github fa-lg"></span>
</a>
diff --git a/docs/reference/din32645.html b/docs/reference/din32645.html
index b3ae61c..b46103c 100644
--- a/docs/reference/din32645.html
+++ b/docs/reference/din32645.html
@@ -96,7 +96,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
- <a href="http://github.com/jranke/chemCal/">
+ <a href="https://github.com/jranke/chemCal/">
<span class="fab fa-github fa-lg"></span>
</a>
diff --git a/docs/reference/index.html b/docs/reference/index.html
index ea1ff81..8549a1d 100644
--- a/docs/reference/index.html
+++ b/docs/reference/index.html
@@ -95,7 +95,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
- <a href="http://github.com/jranke/chemCal/">
+ <a href="https://github.com/jranke/chemCal/">
<span class="fab fa-github fa-lg"></span>
</a>
diff --git a/docs/reference/inverse.predict.html b/docs/reference/inverse.predict.html
index 0ea86a3..aece430 100644
--- a/docs/reference/inverse.predict.html
+++ b/docs/reference/inverse.predict.html
@@ -105,7 +105,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
- <a href="http://github.com/jranke/chemCal/">
+ <a href="https://github.com/jranke/chemCal/">
<span class="fab fa-github fa-lg"></span>
</a>
diff --git a/docs/reference/lod.html b/docs/reference/lod.html
index f647e8c..42fc533 100644
--- a/docs/reference/lod.html
+++ b/docs/reference/lod.html
@@ -103,7 +103,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
- <a href="http://github.com/jranke/chemCal/">
+ <a href="https://github.com/jranke/chemCal/">
<span class="fab fa-github fa-lg"></span>
</a>
diff --git a/docs/reference/loq.html b/docs/reference/loq.html
index 6515e41..973b1ff 100644
--- a/docs/reference/loq.html
+++ b/docs/reference/loq.html
@@ -102,7 +102,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
- <a href="http://github.com/jranke/chemCal/">
+ <a href="https://github.com/jranke/chemCal/">
<span class="fab fa-github fa-lg"></span>
</a>
diff --git a/docs/reference/massart97ex1.html b/docs/reference/massart97ex1.html
index 60f43ab..c82bf6f 100644
--- a/docs/reference/massart97ex1.html
+++ b/docs/reference/massart97ex1.html
@@ -96,7 +96,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
- <a href="http://github.com/jranke/chemCal/">
+ <a href="https://github.com/jranke/chemCal/">
<span class="fab fa-github fa-lg"></span>
</a>
diff --git a/docs/reference/massart97ex3.html b/docs/reference/massart97ex3.html
index 13e28fd..4cbf7ce 100644
--- a/docs/reference/massart97ex3.html
+++ b/docs/reference/massart97ex3.html
@@ -96,7 +96,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
- <a href="http://github.com/jranke/chemCal/">
+ <a href="https://github.com/jranke/chemCal/">
<span class="fab fa-github fa-lg"></span>
</a>
diff --git a/docs/reference/rl95_cadmium.html b/docs/reference/rl95_cadmium.html
index c29ebae..3b311ec 100644
--- a/docs/reference/rl95_cadmium.html
+++ b/docs/reference/rl95_cadmium.html
@@ -96,7 +96,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
- <a href="http://github.com/jranke/chemCal/">
+ <a href="https://github.com/jranke/chemCal/">
<span class="fab fa-github fa-lg"></span>
</a>
diff --git a/docs/reference/rl95_toluene.html b/docs/reference/rl95_toluene.html
index 9022e1e..6b2542b 100644
--- a/docs/reference/rl95_toluene.html
+++ b/docs/reference/rl95_toluene.html
@@ -98,7 +98,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
- <a href="http://github.com/jranke/chemCal/">
+ <a href="https://github.com/jranke/chemCal/">
<span class="fab fa-github fa-lg"></span>
</a>
diff --git a/docs/reference/utstats14.html b/docs/reference/utstats14.html
index 8655c36..a2822fc 100644
--- a/docs/reference/utstats14.html
+++ b/docs/reference/utstats14.html
@@ -40,7 +40,8 @@
<meta property="og:title" content="Example data for calibration with replicates from University of Toronto — utstats14" />
-<meta property="og:description" content="Dataset read into R from http://www.chem.utoronto.ca/coursenotes/analsci/stats/files/example14.xls." />
+<meta property="og:description" content="Dataset read into R from
+ https://sites.chem.utoronto.ca/chemistry/coursenotes/analsci/stats/files/example14.xls." />
@@ -96,7 +97,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
- <a href="http://github.com/jranke/chemCal/">
+ <a href="https://github.com/jranke/chemCal/">
<span class="fab fa-github fa-lg"></span>
</a>
@@ -120,7 +121,8 @@
</div>
<div class="ref-description">
- <p>Dataset read into R from <a href='http://www.chem.utoronto.ca/coursenotes/analsci/stats/files/example14.xls'>http://www.chem.utoronto.ca/coursenotes/analsci/stats/files/example14.xls</a>.</p>
+ <p>Dataset read into R from
+ <a href='https://sites.chem.utoronto.ca/chemistry/coursenotes/analsci/stats/files/example14.xls'>https://sites.chem.utoronto.ca/chemistry/coursenotes/analsci/stats/files/example14.xls</a>.</p>
</div>
@@ -133,7 +135,7 @@
<p>David Stone and Jon Ellis (2011) Statistics in Analytical Chemistry. Tutorial website
maintained by the Departments of Chemistry, University of Toronto.
- <a href='http://www.chem.utoronto.ca/coursenotes/analsci/stats/index.html'>http://www.chem.utoronto.ca/coursenotes/analsci/stats/index.html</a></p>
+ <a href='https://sites.chem.utoronto.ca/chemistry/coursenotes/analsci/stats/index.html'>https://sites.chem.utoronto.ca/chemistry/coursenotes/analsci/stats/index.html</a></p>
</div>
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