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-rw-r--r--R/loq.R41
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diff --git a/R/loq.R b/R/loq.R
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+loq <- function(object, ..., alpha = 0.05, k = 3, n = 1, w.loq = "auto",
+ var.loq = "auto", tol = "default")
+{
+ UseMethod("loq")
+}
+
+loq.default <- function(object, ..., alpha = 0.05, k = 3, n = 1, w.loq = "auto",
+ var.loq = "auto", tol = "default")
+{
+ stop("loq is only implemented for univariate lm objects.")
+}
+
+loq.lm <- function(object, ..., alpha = 0.05, k = 3, n = 1, w.loq = "auto",
+ var.loq = "auto", tol = "default")
+{
+ if (length(object$weights) > 0 && var.loq == "auto" && w.loq == "auto") {
+ stop(paste("If you are using a model from weighted regression,",
+ "you need to specify a reasonable approximation for the",
+ "weight (w.loq) or the variance (var.loq) at the",
+ "limit of quantification"))
+ }
+ xname <- names(object$model)[[2]]
+ xvalues <- object$model[[2]]
+ yname <- names(object$model)[[1]]
+ f <- function(x) {
+ newdata <- data.frame(x = x)
+ names(newdata) <- xname
+ y <- predict(object, newdata)
+ p <- inverse.predict(object, rep(y, n), ws = w.loq,
+ var.s = var.loq, alpha = alpha)
+ (p[["Prediction"]] - k * p[["Confidence"]])^2
+ }
+ if (tol == "default") tol = min(xvalues[xvalues !=0]) / 1000
+ loq.x <- optimize(f, interval = c(0, max(xvalues) * 10), tol = tol)$minimum
+ newdata <- data.frame(x = loq.x)
+ names(newdata) <- xname
+ loq.y <- predict(object, newdata)
+ loq <- list(loq.x, loq.y)
+ names(loq) <- c(xname, yname)
+ return(loq)
+}

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