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-rw-r--r--man/massart97ex3.Rd31
1 files changed, 17 insertions, 14 deletions
diff --git a/man/massart97ex3.Rd b/man/massart97ex3.Rd
index efdcf02..d7f8d00 100644
--- a/man/massart97ex3.Rd
+++ b/man/massart97ex3.Rd
@@ -5,29 +5,32 @@
\description{
Sample dataset from p. 188 to test the package.
}
-\usage{data(massart97ex3)}
+\usage{massart97ex3}
\format{
A dataframe containing 6 levels of x values with 5
observations of y for each level.
}
\examples{
-data(massart97ex3)
-attach(massart97ex3)
-yx <- split(y, x)
-ybar <- sapply(yx, mean)
-s <- round(sapply(yx, sd), digits = 2)
-w <- round(1 / (s^2), digits = 3)
-weights <- w[factor(x)]
-m <- lm(y ~ x, w = weights)
-calplot(m)
+# For reproducing the results for replicate standard measurements in example 8,
+# we need to do the calibration on the means when using chemCal > 0.2
+weights <- with(massart97ex3, {
+ yx <- split(y, x)
+ ybar <- sapply(yx, mean)
+ s <- round(sapply(yx, sd), digits = 2)
+ w <- round(1 / (s^2), digits = 3)
+})
+
+massart97ex3.means <- aggregate(y ~ x, massart97ex3, mean)
+
+m3.means <- lm(y ~ x, w = weights, data = massart97ex3.means)
# The following concords with the book p. 200
-inverse.predict(m, 15, ws = 1.67) # 5.9 +- 2.5
-inverse.predict(m, 90, ws = 0.145) # 44.1 +- 7.9
+inverse.predict(m3.means, 15, ws = 1.67) # 5.9 +- 2.5
+inverse.predict(m3.means, 90, ws = 0.145) # 44.1 +- 7.9
# The LOD is only calculated for models from unweighted regression
# with this version of chemCal
-m0 <- lm(y ~ x)
+m0 <- lm(y ~ x, data = massart97ex3)
lod(m0)
# Limit of quantification from unweighted regression
@@ -38,7 +41,7 @@ loq(m0)
# If we are not using a variance function, we can use the weight from
# the above example as a first approximation (x = 15 is close to our
# loq approx 14 from above).
-loq(m, w.loq = 1.67)
+loq(m3.means, w.loq = 1.67)
# The weight for the loq should therefore be derived at x = 7.3 instead
# of 15, but the graphical procedure of Massart (p. 201) to derive the
# variances on which the weights are based is quite inaccurate anyway.

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