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| author | Ranke Johannes <johannes.ranke@agroscope.admin.ch> | 2025-10-22 10:35:37 +0200 |
|---|---|---|
| committer | Ranke Johannes <johannes.ranke@agroscope.admin.ch> | 2025-10-22 11:57:27 +0200 |
| commit | adc69bd4e1543a229fbee543940f8b92fd499682 (patch) | |
| tree | dcf08c3387f8e7d45290a1ce735896944376b8f3 /GNUmakefile | |
| parent | d6062331f8b3eacab729c6c2bfca0d24363d074c (diff) | |
Adapt to new SMILES names at PubChem
This may break some code using the old smiles names "PubChem_Canonical"
and "PubChem_Isomeric" instead of the new smiles names "PubChem"
(including isotopic and stereochemical information) and
"PubChem_Connectivity" (only containing connectivity, but still
canonical).
Further changes in this commit:
- A fix to the test target in the makefile
- Use markdown syntax for link to objects from other packages in the
documentation
- Adapt the tests
- Increase test coverage a bit
Diffstat (limited to 'GNUmakefile')
| -rw-r--r-- | GNUmakefile | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/GNUmakefile b/GNUmakefile index 2e1ddf8..6bbb53f 100644 --- a/GNUmakefile +++ b/GNUmakefile @@ -32,7 +32,7 @@ build: roxy $(TGZ) test: build "$(RBIN)/Rscript" -e 'library(devtools); devtools::test()' 2>&1 | tee log/test.log - sed -i -e "s/\r.*\r//" test.log + sed -i -e "s/\r.*\r//" log/test.log quickcheck: build _R_CHECK_CRAN_INCOMING_REMOTE_=false "$(RBIN)/R" CMD check $(TGZ) --no-tests |