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authorJohannes Ranke <johannes.ranke@jrwb.de>2026-07-03 11:51:32 +0200
committerJohannes Ranke <johannes.ranke@jrwb.de>2026-07-03 11:51:32 +0200
commit88027b7a70510b48bd7525ffcd536f0808d263e7 (patch)
tree94f83bd420d494334011ff8f67a27483130fe857 /docs/reference/chent.md
parent32caaedcc6b6b8addc9f23fce9dca4188f692fed (diff)
Improve description with README text
Also, read the description into the Readme to have them in sync and update docs with roxygen 8.
Diffstat (limited to 'docs/reference/chent.md')
-rw-r--r--docs/reference/chent.md38
1 files changed, 19 insertions, 19 deletions
diff --git a/docs/reference/chent.md b/docs/reference/chent.md
index 40716ce..aeaac75 100644
--- a/docs/reference/chent.md
+++ b/docs/reference/chent.md
@@ -6,7 +6,7 @@ RDKit if RDKit and its python bindings are installed.
## Format
-An [R6::R6Class](https://r6.r-lib.org/reference/R6Class.html) generator
+An [R6Class](https://r6.r-lib.org/reference/R6Class.html) generator
object
## Public fields
@@ -103,7 +103,7 @@ object
### Public methods
-- [`chent$new()`](#method-chent-new)
+- [`chent$new()`](#method-chent-initialize)
- [`chent$try_pubchem()`](#method-chent-try_pubchem)
@@ -139,7 +139,7 @@ object
------------------------------------------------------------------------
-### Method `new()`
+### `chent$new()`
Creates a new instance of this
[R6](https://r6.r-lib.org/reference/R6Class.html) class.
@@ -195,7 +195,7 @@ Creates a new instance of this
------------------------------------------------------------------------
-### Method `try_pubchem()`
+### `chent$try_pubchem()`
Try to get chemical information from PubChem
@@ -217,7 +217,7 @@ Try to get chemical information from PubChem
------------------------------------------------------------------------
-### Method `get_pubchem()`
+### `chent$get_pubchem()`
Get chemical information from PubChem for a known PubChem CID
@@ -233,7 +233,7 @@ Get chemical information from PubChem for a known PubChem CID
------------------------------------------------------------------------
-### Method `get_rdkit()`
+### `chent$get_rdkit()`
Get chemical information from RDKit if available
@@ -249,7 +249,7 @@ Get chemical information from RDKit if available
------------------------------------------------------------------------
-### Method `get_chyaml()`
+### `chent$get_chyaml()`
Obtain information from a YAML file
@@ -274,7 +274,7 @@ Obtain information from a YAML file
------------------------------------------------------------------------
-### Method `add_p0()`
+### `chent$add_p0()`
Add a vapour pressure
@@ -306,7 +306,7 @@ Add a vapour pressure
------------------------------------------------------------------------
-### Method `add_cwsat()`
+### `chent$add_cwsat()`
Add a water solubility
@@ -342,7 +342,7 @@ Add a water solubility
------------------------------------------------------------------------
-### Method `add_PUF()`
+### `chent$add_PUF()`
Add a plant uptake factor
@@ -375,7 +375,7 @@ Add a plant uptake factor
------------------------------------------------------------------------
-### Method `add_TP()`
+### `chent$add_TP()`
Add a transformation product to the internal list
@@ -399,7 +399,7 @@ Add a transformation product to the internal list
------------------------------------------------------------------------
-### Method `add_transformation()`
+### `chent$add_transformation()`
Add a line in the internal dataframe holding observed transformations
@@ -444,7 +444,7 @@ Add a line in the internal dataframe holding observed transformations
------------------------------------------------------------------------
-### Method `add_soil_degradation()`
+### `chent$add_soil_degradation()`
Add a line in the internal dataframe holding modelling DT50 values
@@ -549,7 +549,7 @@ Add a line in the internal dataframe holding modelling DT50 values
------------------------------------------------------------------------
-### Method `add_soil_ff()`
+### `chent$add_soil_ff()`
Add one or more formation fractions for degradation in soil
@@ -585,7 +585,7 @@ Add one or more formation fractions for degradation in soil
------------------------------------------------------------------------
-### Method `add_soil_sorption()`
+### `chent$add_soil_sorption()`
Add soil sorption data
@@ -669,7 +669,7 @@ Add soil sorption data
------------------------------------------------------------------------
-### Method [`pdf()`](https://rdrr.io/r/grDevices/pdf.html)
+### `chent$pdf()`
Write a PDF image of the structure
@@ -697,7 +697,7 @@ Write a PDF image of the structure
------------------------------------------------------------------------
-### Method [`png()`](https://rdrr.io/r/grDevices/png.html)
+### `chent$png()`
Write a PNG image of the structure
@@ -725,7 +725,7 @@ Write a PNG image of the structure
------------------------------------------------------------------------
-### Method `emf()`
+### `chent$emf()`
Write an EMF image of the structure using
[emf](https://rdrr.io/pkg/devEMF/man/emf.html)
@@ -746,7 +746,7 @@ Write an EMF image of the structure using
------------------------------------------------------------------------
-### Method `clone()`
+### `chent$clone()`
The objects of this class are cloneable with this method.

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