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authorJohannes Ranke <jranke@uni-bremen.de>2023-11-12 22:22:30 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2023-11-12 22:22:30 +0100
commite92727f871c2c8217251e34e52438f18c5f013bb (patch)
treeb6fd0c200d41cf5339e8e36a06d6b4d0c72daa3a /docs/reference/pai.html
parent9828b97fb946104f15e537fc6a53653f1bceb27d (diff)
Import URLencode from utils, rebuild docs
This was caught by pkgdown apparently not loading the utils package by default.
Diffstat (limited to 'docs/reference/pai.html')
-rw-r--r--docs/reference/pai.html14
1 files changed, 13 insertions, 1 deletions
diff --git a/docs/reference/pai.html b/docs/reference/pai.html
index e3170af..05a300f 100644
--- a/docs/reference/pai.html
+++ b/docs/reference/pai.html
@@ -172,7 +172,19 @@ BCPC compendium</p></dd>
<span class="r-msg co"><span class="r-pr">#&gt;</span> PubChem:</span>
<span class="r-msg co"><span class="r-pr">#&gt;</span> Trying to get chemical information from RDKit using PubChem_Canonical SMILES</span>
<span class="r-msg co"><span class="r-pr">#&gt;</span> CCNC1=NC(=NC(=N1)Cl)NC(C)C</span>
-<span class="r-err co"><span class="r-pr">#&gt;</span> <span class="error">Error in URLencode(self$identifier):</span> could not find function "URLencode"</span>
+<span class="r-msg co"><span class="r-pr">#&gt;</span> Did not find chyaml file ./atrazine.yaml</span>
+<span class="r-plt img"><img src="pai-1.png" alt="" width="700" height="433"></span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> &lt;pai&gt; with ISO common name $iso atrazine </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> &lt;chent&gt;</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> Identifier $identifier atrazine </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> InChI Key $inchikey MXWJVTOOROXGIU-UHFFFAOYSA-N </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> SMILES string $smiles:</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> PubChem_Canonical </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> "CCNC1=NC(=NC(=N1)Cl)NC(C)C" </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> Molecular weight $mw: 215.7 </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> PubChem synonyms (up to 10):</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [1] "atrazine" "1912-24-9" "Gesaprim" "Oleogesaprim" "Aktikon" </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [6] "Atranex" "Chromozin" "Atazinax" "Atrasine" "Gesoprim" </span>
</code></pre></div>
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