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authorranke <ranke@d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc>2005-09-16 15:28:46 +0000
committerranke <ranke@d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc>2005-09-16 15:28:46 +0000
commit2d0ed946c5738a10dbe6413292738ff6dbf87c5d (patch)
treed7d5cc70bd0a2196d019624cb5b2a123ec5b2f48
parent70b8298f02a240de7b97a8336035f825828a8110 (diff)
Added the documentation for the drdata function update.
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@37 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
-rw-r--r--DESCRIPTION15
-rw-r--r--man/drdata.Rd9
2 files changed, 16 insertions, 8 deletions
diff --git a/DESCRIPTION b/DESCRIPTION
index e59d6c6..a0843bd 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,6 +1,6 @@
Package: drfit
-Version: 0.04-34
-Date: 2005-08-02
+Version: 0.04-36
+Date: 2005-09-16
Title: Dose-response data evaluation
Author: Johannes Ranke <jranke@uni-bremen.de>
Maintainer: Johannes Ranke <jranke@uni-bremen.de>
@@ -12,11 +12,12 @@ Description: drfit provides basic functions for fitting dose-response curves to
distribution (logit fit), of the weibull distribution (weibull fit) and
a linear-logistic model ("linlogit" fit), derived from the latter,
which is used to describe data showing stimulation at low doses
- (hormesis). In addition, functions checking, plotting and retrieving
- dose-response data of the UFT Bremen, Department of Bioorganic
- Chemistry, are provided. I would be delighted if you would join in
- this effort of creating useful and useable tools for dealing with
- dose-response data from biological testing.
+ (hormesis).
+ In addition, functions checking, plotting and retrieving dose-response data
+ of the UFT Bremen are provided.
+ I would be delighted if you would join in this effort of creating useful
+ and useable tools for dealing with dose-response data from biological
+ testing.
License: GPL version 2 or newer
URL: http://www.r-project.org,
http://www.uft.uni-bremen.de/chemie/ranke,
diff --git a/man/drdata.Rd b/man/drdata.Rd
index fe54ffe..3f794bc 100644
--- a/man/drdata.Rd
+++ b/man/drdata.Rd
@@ -6,7 +6,8 @@
}
\usage{
drdata(substances, experimentator = "\%", db = "cytotox", celltype = "IPC-81",
- enzymetype="AChE", whereClause = "1", ok = "'ok','no fit'")
+ enzymetype="AChE", organism="Vibrio fischeri", endpoint="Luminescence",
+ whereClause = "1", ok = "'ok','no fit'")
}
\arguments{
\item{substances}{
@@ -23,6 +24,12 @@
Currently, only data for IPC-81, C6, NB4, HeLa, Jurkat and U937 are supported.}
\item{enzymetype}{
Currently, only data for AChE, GR and GST are supported.}
+ \item{organism}{
+ The organism that was exposed to the chemical. Only important if the database
+ "ecotox" is used. Defaults to "Vibrio fischeri".}
+ \item{endpoint}{
+ The endpoint that should be used for selecting the data. Only important if the
+ database "ecotox" is used. Defaults to "Vibrio fischeri".}
\item{whereClause}{
With this argument, additional conditions for the SQL query can be set,
e.g. "where plate != 710". The default is 1 (in SQL syntax this means TRUE).}

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