diff options
| author | ranke <ranke@d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc> | 2005-12-21 15:33:22 +0000 |
|---|---|---|
| committer | ranke <ranke@d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc> | 2005-12-21 15:33:22 +0000 |
| commit | 699448335d6fc5668b569577cb38a628c258eaec (patch) | |
| tree | 3e282bbf0a58791b49572153876188526d6cbfec /chm/drplot.html | |
| parent | d89badab8c65995b6381418989ffed965fa9d626 (diff) | |
Changed the terminology from EC50 to ED50 reflecting that the package is meant
for dose-response analysis in general and not only for concentration-response
analysis. This is the first revision that has been prepared with the knowledge
of the existence of the drc package for dose-response curve analysis.
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@48 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
Diffstat (limited to 'chm/drplot.html')
| -rw-r--r-- | chm/drplot.html | 143 |
1 files changed, 0 insertions, 143 deletions
diff --git a/chm/drplot.html b/chm/drplot.html deleted file mode 100644 index 84cf12e..0000000 --- a/chm/drplot.html +++ /dev/null @@ -1,143 +0,0 @@ -<html><head><title>Plot dose-response models</title>
-<link rel="stylesheet" type="text/css" href="Rchm.css">
-</head>
-<body>
-
-<table width="100%"><tr><td>drplot(drfit)</td><td align="right">R Documentation</td></tr></table><object type="application/x-oleobject" classid="clsid:1e2a7bd0-dab9-11d0-b93a-00c04fc99f9e">
-<param name="keyword" value="R: drplot">
-<param name="keyword" value=" Plot dose-response models">
-</object>
-
-
-<h2>Plot dose-response models</h2>
-
-
-<h3>Description</h3>
-
-<p>
-Produce graphics of dose-response data and dose-response relationships
-either combined or separately, for one or more substances.
-</p>
-
-
-<h3>Usage</h3>
-
-<pre>
- drplot(drresults, data, dtype, alpha, path, fileprefix, overlay,
- postscript, color, datacolors, fitcolors)
-</pre>
-
-
-<h3>Arguments</h3>
-
-<table summary="R argblock">
-<tr valign="top"><td><code>drresults</code></td>
-<td>
-A data frame as returned from <code><a href="drfit.html">drfit</a></code>.
-</td></tr>
-<tr valign="top"><td><code>data</code></td>
-<td>
-A data frame as returned from <code><a href="drdata.html">drdata</a></code>. If data is to be
-plotted, the data frame has to contain at least a factor called
-"substance", a vector called "unit" containing the unit used for the dose,
-a column "response" with the response values of the test system normalized
-between 0 and 1, a column "dose" with the numeric dose values and a factor
-called "dosefactor" containing the dose as a factor. If plotting of the data is
-not required, data can be set to FALSE.
-</td></tr>
-<tr valign="top"><td><code>dtype</code></td>
-<td>
-A string describing if the raw data should be plotted ("raw"), or
-an error bar should be constructed from the standard deviations of the
-responses at each dose level ("std", default value) or from the confidence
-intervals ("conf"). Of course, dtype only makes a difference, if a valid data
-object has been referenced.
-</td></tr>
-<tr valign="top"><td><code>alpha</code></td>
-<td>
-The confidence level, defaulting to 0.95, only used if dtype "conf" has been
-chosen.
-</td></tr>
-<tr valign="top"><td><code>path</code></td>
-<td>
-The path where graphic files should be put if any are produced. Defaults
-to "./" i.e. the current working directory of R.
-</td></tr>
-<tr valign="top"><td><code>fileprefix</code></td>
-<td>
-A string which will form the beginning of each filename, if graphic files are
-created. Defaults to "drplot".
-</td></tr>
-<tr valign="top"><td><code>overlay</code></td>
-<td>
-If TRUE, all output will be put into one graph, otherwise a separate graph
-will be created for each substance. In the latter case, on-screen display
-(postscript=FALSE) only works correctly for data plots. Dose-response models
-will all be put into the last graph in this case.
-</td></tr>
-<tr valign="top"><td><code>postscript</code></td>
-<td>
-If TRUE, (a) postscript graph(s) will be created. Otherwise, graphics will be
-displayed with a screen graphics device.
-</td></tr>
-<tr valign="top"><td><code>color</code></td>
-<td>
-If TRUE, a sensible selection of colors will be attempted. If false, everything
-will be drawn in black
-</td></tr>
-<tr valign="top"><td><code>datacolors</code></td>
-<td>
-This is a vector of colors, defaulting to 1:8, used for plotting the data.
-</td></tr>
-<tr valign="top"><td><code>fitcolors</code></td>
-<td>
-Here you can specify a palette for the colors of the dose-response fits. The
-default value is "default", which produces the default palette, if the
-number of fits to be plotted is 8 or less. Otherwise, rainbow colors
-will be plotted. Unless there is more than one fit per substance to be plotted,
-or the number of fits is larger than 8, the fitcolors will match the
-datacolors.
-</td></tr>
-</table>
-
-<h3>Value</h3>
-
-<table summary="R argblock">
-<tr valign="top"><td><code>results</code></td>
-<td>
-You will get plots of data and/or the fitted dose-response curves, on the
-screen and/or as postscript files, depending on the parameters.
-</td></tr>
-</table>
-
-<h3>Note</h3>
-
-<p>
-Turn off the colors if you don't like them and don't want to fiddle with
-them. Treatment of legends is quite bad. Be sure all devices are closed
-(e.g. by calling <code>dev.off()</code>) before calling <code>drplot</code> again.
-</p>
-
-
-<h3>Author(s)</h3>
-
-<p>
-Johannes Ranke
-<a href="mailto:jranke@uni-bremen.de">jranke@uni-bremen.de</a>
-<a href="http://www.uft.uni-bremen.de/chemie/ranke">http://www.uft.uni-bremen.de/chemie/ranke</a>
-</p>
-
-
-<h3>Examples</h3>
-
-<pre>
-data(antifoul)
-r <- drfit(antifoul)
-## Not run: drplot(r,antifoul)
-</pre>
-
-
-
-<hr><div align="center"><a href="00Index.html">[Package Contents]</a></div>
-
-</body></html>
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