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-rw-r--r--check.log72
1 files changed, 25 insertions, 47 deletions
diff --git a/check.log b/check.log
index cad4fc0..165a11c 100644
--- a/check.log
+++ b/check.log
@@ -1,15 +1,10 @@
-* using log directory 'C:/Users/johannes/git/drfit/drfit.Rcheck'
+* using log directory ‘/home/jranke/git/drfit/drfit.Rcheck’
* using R version 3.5.1 (2018-07-02)
-* using platform: i386-w64-mingw32 (32-bit)
-* using session charset: ISO8859-1
-* using option '--as-cran'
-* checking for file 'drfit/DESCRIPTION' ... OK
-* this is package 'drfit' version '0.7.2'
+* using platform: x86_64-pc-linux-gnu (64-bit)
+* using session charset: UTF-8
+* checking for file ‘drfit/DESCRIPTION’ ... OK
+* this is package ‘drfit’ version ‘0.7.2’
* package encoding: UTF-8
-* checking CRAN incoming feasibility ... NOTE
-Maintainer: 'Johannes Ranke <jranke@uni-bremen.de>'
-
-The Date field is over a month old.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
@@ -17,13 +12,12 @@ The Date field is over a month old.
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
-* checking serialization versions ... OK
-* checking whether package 'drfit' can be installed ... OK
+* checking for sufficient/correct file permissions ... OK
+* checking whether package ‘drfit’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
-* checking top-level files ... NOTE
-Files 'README.md' or 'NEWS.md' cannot be checked without 'pandoc' being installed.
+* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
@@ -34,7 +28,7 @@ Files 'README.md' or 'NEWS.md' cannot be checked without 'pandoc' being installe
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
-* checking use of S3 registration ... OK
+* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
@@ -42,49 +36,33 @@ Files 'README.md' or 'NEWS.md' cannot be checked without 'pandoc' being installe
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
-* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
-* checking contents of 'data' directory ... OK
+* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
- WARNING
-'qpdf' is needed for checks on size reduction of PDFs
-* checking installed files from 'inst/doc' ... OK
+* checking sizes of PDF files under ‘inst/doc’ ... OK
+* checking installed files from ‘inst/doc’ ... OK
* checking examples ... OK
-* checking for unstated dependencies in 'tests' ... OK
+* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
- Running 'IM1xIPC81.R'
- Comparing 'IM1xIPC81.Rout' to 'IM1xIPC81.Rout.save' ... OK
- Running 'IM1xVibrio.R'
- Comparing 'IM1xVibrio.Rout' to 'IM1xVibrio.Rout.save' ... OK
- Running 'XY.R'
- Comparing 'XY.Rout' to 'XY.Rout.save' ... OK
- Running 'antifoul.R'
- Comparing 'antifoul.Rout' to 'antifoul.Rout.save' ... OK
- Running 'pyrithione.R'
- Comparing 'pyrithione.Rout' to 'pyrithione.Rout.save' ... OK
+ Running ‘IM1xIPC81.R’
+ Comparing ‘IM1xIPC81.Rout’ to ‘IM1xIPC81.Rout.save’ ... OK
+ Running ‘IM1xVibrio.R’
+ Comparing ‘IM1xVibrio.Rout’ to ‘IM1xVibrio.Rout.save’ ... OK
+ Running ‘XY.R’
+ Comparing ‘XY.Rout’ to ‘XY.Rout.save’ ... OK
+ Running ‘antifoul.R’
+ Comparing ‘antifoul.Rout’ to ‘antifoul.Rout.save’ ... OK
+ Running ‘pyrithione.R’
+ Comparing ‘pyrithione.Rout’ to ‘pyrithione.Rout.save’ ... OK
OK
-* checking PDF version of manual ... WARNING
-LaTeX errors when creating PDF version.
-This typically indicates Rd problems.
-* checking PDF version of manual without hyperrefs or index ... ERROR
-Re-running with no redirection of stdout/stderr.
-Hmm ... looks like a package
-Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
- pdflatex is not available
-Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
- pdflatex is not available
-Error in running tools::texi2pdf()
-You may want to clean up by 'rm -Rf C:/Users/johannes/AppData/Local/Temp/RtmpAdBCqG/Rd2pdfee0141549db'
+* checking PDF version of manual ... OK
* DONE
-Status: 1 ERROR, 2 WARNINGs, 2 NOTEs
-See
- 'C:/Users/johannes/git/drfit/drfit.Rcheck/00check.log'
-for details.
+Status: OK

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