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+    <h1>Get dose-response data via RODBC</h1>
+    </div>
+
+    
+    <p>Get dose-response data from an adequate ODBC data source</p>
+    
+
+    <pre><span class='fu'>drdata</span>(<span class='no'>substances</span>, <span class='kw'>experimentator</span> <span class='kw'>=</span> <span class='st'>"%"</span>, <span class='kw'>db</span> <span class='kw'>=</span> <span class='st'>"cytotox"</span>, <span class='kw'>celltype</span> <span class='kw'>=</span> <span class='st'>"IPC-81"</span>,
+    <span class='kw'>enzymetype</span><span class='kw'>=</span><span class='st'>"AChE"</span>, <span class='kw'>organism</span><span class='kw'>=</span><span class='st'>"Vibrio fischeri"</span>, <span class='kw'>endpoint</span><span class='kw'>=</span><span class='st'>"Luminescence"</span>,
+    <span class='kw'>whereClause</span> <span class='kw'>=</span> <span class='st'>"1"</span>, <span class='kw'>ok</span> <span class='kw'>=</span> <span class='st'>"'ok','no fit'"</span>)</pre>
+    
+    <h2 class="hasAnchor" id="arguments"><a class="anchor" href="#arguments"></a> Arguments</h2>
+    <table class="ref-arguments">
+    <colgroup><col class="name" /><col class="desc" /></colgroup>
+    <tr>
+      <th>substances</th>
+      <td><p>A string or an array of strings with the substance names for
+    which dose-response data is to be retrieved.</p></td>
+    </tr>
+    <tr>
+      <th>experimentator</th>
+      <td><p>The name of the experimentator whose data is to be used. Default is "<!-- %", -->
+    which means that data from all experimentators are retrieved.</p></td>
+    </tr>
+    <tr>
+      <th>db</th>
+      <td><p>The database to be used. Currently, the databases "cytotox", "enzymes"
+    and "ecotox" of the UFT Department of Bioorganic Chemistry are 
+    supported (default is "cytotox").</p></td>
+    </tr>
+    <tr>
+      <th>celltype</th>
+      <td><p>Currently, only data for IPC-81, C6, NB4, HeLa, Jurkat and U937 are
+    supported.</p></td>
+    </tr>
+    <tr>
+      <th>enzymetype</th>
+      <td><p>Currently, only data for AChE, GR and GST are supported.</p></td>
+    </tr>
+    <tr>
+      <th>organism</th>
+      <td><p>The organism that was exposed to the chemical. Only important if the database
+    "ecotox" is used. Defaults to "Vibrio fischeri".</p></td>
+    </tr>
+    <tr>
+      <th>endpoint</th>
+      <td><p>The endpoint that should be used for selecting the data. Only important if
+    the database "ecotox" is used. Defaults to "Luminescence".</p></td>
+    </tr>
+    <tr>
+      <th>whereClause</th>
+      <td><p>With this argument, additional conditions for the SQL query can be set, 
+    e.g. "plate != 710" (i.e. "Do not retrieve data for plate 710"). The
+    default is 1 (in SQL syntax this means TRUE).</p></td>
+    </tr>
+    <tr>
+      <th>ok</th>
+      <td><p>With the default value "'ok','no fit'", only data that has been checked and
+    set to "ok" or "no fit" in the database is retrieved. The argument "no fit"
+    will result in not using the data for fitting, but it will be plotted.
+    Another sensible argument would be "'ok','no fit','?'", in order to
+    additionally retrieve data which has not yet been checked.</p></td>
+    </tr>
+    </table>
+    
+    <h2 class="hasAnchor" id="value"><a class="anchor" href="#value"></a>Value</h2>
+
+    <p></p>
+<dt>data</dt><dd><p>A data frame with a factor describing the dose levels, the numeric dose
+    levels and a numeric column describing the response, as well as the entries
+    for plate, experimentator, performed (date of test performance), celltype,
+    unit (of the dose/concentration), and for the ok field in the database.</p></dd>
+
+    
+    <h2 class="hasAnchor" id="details"><a class="anchor" href="#details"></a>Details</h2>
+
+    <p>The function is currently only used for retrieving data from the
+  mysql database "cytotox" of the UFT Department of Bioorganic Chemistry.
+  Access to this database is limited to UFT staff.  Additionally to the
+  installation of the RODBC package, it is required to set up a ODBC data
+  source with the name "cytotox", using an ODBC driver for mysql, probably
+  myODBC. Then, under Unix, you can use iodbc or unixodbc for setting up the
+  respective data source with data source name (DSN) "cytotox". For my
+  setting using unixodbc, I am using the file <code class="file">/etc/odbcinst.ini</code>
+  containing:</p><table><tr><td>
+    [MySQL] </td>
+<td> </td>
+</tr><tr><td> </td>
+<td>
+    Description </td>
+</tr><tr><td> = </td>
+<td> MySQL driver for ODBC </td>
+</tr><tr><td>
+    Driver </td>
+<td> = </td>
+</tr><tr><td> /usr/local/lib/libmyodbc.so </td>
+<td>
+    Setup </td>
+</tr><tr><td> = </td>
+<td> /usr/lib/odbc/libodbcmyS.so </td>
+</tr></table><p>and the file <code class="file">/etc/odbc.ini</code> containing:</p><table><tr><td>
+    [cytotox] </td>
+<td> </td>
+</tr><tr><td> </td>
+<td>
+    Description </td>
+</tr><tr><td> = </td>
+<td> Cytotoxicity database of the department of bioorganic chemistry, UFT Bremen </td>
+</tr><tr><td>
+    Driver </td>
+<td> = </td>
+</tr><tr><td> MySQL </td>
+<td>
+    Trace </td>
+</tr><tr><td> = </td>
+<td> Yes  </td>
+</tr><tr><td>
+    TraceFile </td>
+<td> = </td>
+</tr><tr><td> /tmp/odbc.log  </td>
+<td>
+    Database </td>
+</tr><tr><td> = </td>
+<td> cytotox  </td>
+</tr><tr><td>
+    Server </td>
+<td> = </td>
+</tr><tr><td> eckehaat  </td>
+<td>
+    Port </td>
+</tr><tr><td> = </td>
+<td> 3306  </td>
+</tr></table>
+    
+
+    <h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examples</h2>
+    <pre class="examples"><div class='input'><span class='co'># Get cytotoxicity data for Tributyltin and zinc pyrithione, tested with IPC-81</span>
+<span class='co'># cells</span>
+<span class='co'>## Not run: drdata(c("TBT","ZnPT2"))</span></div></pre>
+  </div>
+  <div class="col-md-3 hidden-xs hidden-sm" id="sidebar">
+    <h2>Contents</h2>
+    <ul class="nav nav-pills nav-stacked">
+      <li><a href="#arguments">Arguments</a></li>
+      
+      <li><a href="#value">Value</a></li>
+
+      <li><a href="#details">Details</a></li>
+      
+      <li><a href="#examples">Examples</a></li>
+    </ul>
+
+    <h2>Author</h2>
+    
+  Johannes Ranke 
+  <a href='mailto:jranke@uni-bremen.de'>jranke@uni-bremen.de</a> 
+  <a href = 'http://www.uft.uni-bremen.de/chemie/ranke'>http://www.uft.uni-bremen.de/chemie/ranke</a>
+
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