diff options
Diffstat (limited to 'man/drdata.Rd')
| -rw-r--r-- | man/drdata.Rd | 22 |
1 files changed, 11 insertions, 11 deletions
diff --git a/man/drdata.Rd b/man/drdata.Rd index 8f545da..4fb6740 100644 --- a/man/drdata.Rd +++ b/man/drdata.Rd @@ -2,11 +2,11 @@ \alias{drdata} \title{Get dose-response data via RODBC} \description{ - Get dose-response data from an adequate ODBC data source + Get dose-response data from an adequate ODBC data source } \usage{ - drdata(substances, experimentator = "\%", db = "cytotox", celltype = "IPC-81", - enzymetype="AChE", organism="Vibrio fischeri", endpoint="Luminescence", + drdata(substances, experimentator = "\%", db = "cytotox", celltype = "IPC-81", + enzymetype="AChE", organism="Vibrio fischeri", endpoint="Luminescence", whereClause = "1", ok = "'ok','no fit'") } \arguments{ @@ -18,11 +18,11 @@ which means that data from all experimentators are retrieved.} \item{db}{ The database to be used. Currently, the databases "cytotox", "enzymes" - and "ecotox" of the UFT Department of Bioorganic Chemistry are - supported (default is "cytotox").} + and "ecotox" of the UFT Department of Bioorganic Chemistry are + supported (default is "cytotox").} \item{celltype}{ Currently, only data for IPC-81, C6, NB4, HeLa, Jurkat and U937 are - supported.} + supported.} \item{enzymetype}{ Currently, only data for AChE, GR and GST are supported.} \item{organism}{ @@ -32,9 +32,9 @@ The endpoint that should be used for selecting the data. Only important if the database "ecotox" is used. Defaults to "Luminescence".} \item{whereClause}{ - With this argument, additional conditions for the SQL query can be set, + With this argument, additional conditions for the SQL query can be set, e.g. "plate != 710" (i.e. "Do not retrieve data for plate 710"). The - default is 1 (in SQL syntax this means TRUE).} + default is 1 (in SQL syntax this means TRUE).} \item{ok}{ With the default value "'ok','no fit'", only data that has been checked and set to "ok" or "no fit" in the database is retrieved. The argument "no fit" @@ -58,7 +58,7 @@ myODBC. Then, under Unix, you can use iodbc or unixodbc for setting up the respective data source with data source name (DSN) "cytotox". For my setting using unixodbc, I am using the file \file{/etc/odbcinst.ini} - containing: + containing: \tabular{lll}{ [MySQL] \tab \tab \cr Description \tab = \tab MySQL driver for ODBC \cr @@ -83,8 +83,8 @@ \dontrun{drdata(c("TBT","ZnPT2"))} } \author{ - Johannes Ranke - \email{jranke@uni-bremen.de} + Johannes Ranke + \email{jranke@uni-bremen.de} \url{http://www.uft.uni-bremen.de/chemie/ranke} } \keyword{IO} |