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-rw-r--r--man/XY.Rd3
-rw-r--r--man/antifoul.Rd3
-rw-r--r--man/checkcontrols.Rd4
-rw-r--r--man/checkexperiment.Rd5
-rw-r--r--man/checksubstance.Rd5
-rw-r--r--man/drcfit.Rd1
-rw-r--r--man/drdata.Rd16
-rw-r--r--man/drfit.Rd1
-rw-r--r--man/drplot.Rd1
-rw-r--r--man/linlogitf.Rd1
10 files changed, 17 insertions, 23 deletions
diff --git a/man/XY.Rd b/man/XY.Rd
index 82a48fe..54e6bdc 100644
--- a/man/XY.Rd
+++ b/man/XY.Rd
@@ -14,7 +14,4 @@
\examples{
\dontrun{demo(XY)}
}
-\source{
- \url{http://www.uft.uni-bremen.de/chemie}
-}
\keyword{datasets}
diff --git a/man/antifoul.Rd b/man/antifoul.Rd
index e782636..7d814a6 100644
--- a/man/antifoul.Rd
+++ b/man/antifoul.Rd
@@ -28,7 +28,4 @@ rantifoul.drc <- drcfit(antifoul,
print(rantifoul.drc, digits = 5)
}
-\source{
- \url{http://www.uft.uni-bremen.de/chemie}
-}
\keyword{datasets}
diff --git a/man/checkcontrols.Rd b/man/checkcontrols.Rd
index 91d2dff..d99c342 100644
--- a/man/checkcontrols.Rd
+++ b/man/checkcontrols.Rd
@@ -6,7 +6,8 @@
experiments from a specified database.
}
\usage{
- checkcontrols(last = 10, id = NULL, db = "cytotox",
+ checkcontrols(last = 10, id = NULL,
+ db = c("cytotox", "enzymes", "ecotox"),
celltype = "IPC-81", enzymetype = "AChE",
organism = "Vibrio fischeri",
endpoint = "\%", qcc = c("R", "xbar"))
@@ -54,6 +55,5 @@
\author{
Johannes Ranke
\email{jranke@uni-bremen.de}
- \url{http://www.uft.uni-bremen.de/chemie/ranke}
}
\keyword{database}
diff --git a/man/checkexperiment.Rd b/man/checkexperiment.Rd
index 6a682fa..9d365f8 100644
--- a/man/checkexperiment.Rd
+++ b/man/checkexperiment.Rd
@@ -7,8 +7,8 @@
specified database, box plot controls, and plot the dose-response data.
}
\usage{
- checkplate(id, db = "cytotox")
- checkexperiment(id, db = "ecotox", endpoint = "\%")
+ checkplate(id, db = c("cytotox", "enzymes"))
+ checkexperiment(id, db = c("ecotox", "cytotox", "enzymes"), endpoint = "\%")
}
\arguments{
\item{id}{
@@ -31,6 +31,5 @@
\author{
Johannes Ranke
\email{jranke@uni-bremen.de}
- \url{http://www.uft.uni-bremen.de/chemie/ranke}
}
\keyword{database}
diff --git a/man/checksubstance.Rd b/man/checksubstance.Rd
index 284ee88..2e4d62d 100644
--- a/man/checksubstance.Rd
+++ b/man/checksubstance.Rd
@@ -6,7 +6,9 @@
the data.
}
\usage{
- checksubstance(substance, db = "cytotox", experimentator = "\%",
+ checksubstance(substance,
+ db = c("cytotox", "enzymes", "ecotox"),
+ experimentator = "\%",
celltype = "\%", enzymetype = "\%", organism = "\%",
endpoint = "\%",
whereClause = "1", ok = "\%")
@@ -52,7 +54,6 @@
\author{
Johannes Ranke
\email{jranke@uni-bremen.de}
- \url{http://www.uft.uni-bremen.de/chemie/ranke}
}
\keyword{database}
\keyword{internal}
diff --git a/man/drcfit.Rd b/man/drcfit.Rd
index 67462ba..db84875 100644
--- a/man/drcfit.Rd
+++ b/man/drcfit.Rd
@@ -148,7 +148,6 @@ format(r, digits = 2)
}
\author{
Johannes Ranke \email{jranke@uni-bremen.de}
- \url{http://www.uft.uni-bremen.de/chemie/ranke}
The functionality of the drc package used under the hood in this function
was written by Christian Ritz.
}
diff --git a/man/drdata.Rd b/man/drdata.Rd
index 2bb0b4d..3999fc6 100644
--- a/man/drdata.Rd
+++ b/man/drdata.Rd
@@ -5,8 +5,9 @@
Get dose-response data from an adequate ODBC data source
}
\usage{
- drdata(substances, experimentator = "\%", db = "cytotox", celltype = "IPC-81",
- enzymetype="AChE", organism="Vibrio fischeri", endpoint="Luminescence",
+ drdata(substances, experimentator = "\%", db = "cytotox",
+ celltype = "IPC-81", enzymetype = "AChE", organism = "Vibrio fischeri",
+ endpoint = "Luminescence",
whereClause = "1", ok = "'ok','no fit'")
}
\arguments{
@@ -78,14 +79,17 @@
}
}
\examples{
-# Get cytotoxicity data for Tributyltin and zinc pyrithione, tested with IPC-81
-# cells
-\dontrun{drdata(c("TBT","ZnPT2"))}
+ \dontrun{
+
+ # Get cytotoxicity data for Tributyltin and zinc pyrithione, tested with IPC-81
+ # cells
+ drdata(c("TBT", "ZnPT2"))
+
+ }
}
\author{
Johannes Ranke
\email{jranke@uni-bremen.de}
- \url{http://www.uft.uni-bremen.de/chemie/ranke}
}
\keyword{IO}
\keyword{database}
diff --git a/man/drfit.Rd b/man/drfit.Rd
index ec7fa70..b44a20f 100644
--- a/man/drfit.Rd
+++ b/man/drfit.Rd
@@ -177,7 +177,6 @@ format(r, digits = 2)
\author{
Johannes Ranke
\email{jranke@uni-bremen.de}
- \url{http://www.uft.uni-bremen.de/chemie/ranke}
}
\keyword{models}
\keyword{regression}
diff --git a/man/drplot.Rd b/man/drplot.Rd
index d8d7eb3..559ed8e 100644
--- a/man/drplot.Rd
+++ b/man/drplot.Rd
@@ -130,7 +130,6 @@ drplot(r,antifoul)
\author{
Johannes Ranke
\email{jranke@uni-bremen.de}
- \url{http://www.uft.uni-bremen.de/chemie/ranke}
}
\keyword{models}
\keyword{regression}
diff --git a/man/linlogitf.Rd b/man/linlogitf.Rd
index 2c9ddc4..a4360d6 100644
--- a/man/linlogitf.Rd
+++ b/man/linlogitf.Rd
@@ -29,7 +29,6 @@
\author{
Johannes Ranke
\email{jranke@uni-bremen.de}
- \url{http://www.uft.uni-bremen.de/chemie/ranke}
}
\keyword{models}
\keyword{regression}

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