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-rw-r--r--vignettes/examples.Rnw6
-rw-r--r--vignettes/examples.pdfbin293187 -> 293678 bytes
-rw-r--r--vignettes/mkin.Rnw4
-rw-r--r--vignettes/mkin.pdfbin163652 -> 163548 bytes
4 files changed, 5 insertions, 5 deletions
diff --git a/vignettes/examples.Rnw b/vignettes/examples.Rnw
index fa35c8f..4897f7c 100644
--- a/vignettes/examples.Rnw
+++ b/vignettes/examples.Rnw
@@ -433,7 +433,7 @@ Z.mkin.1 <- mkinmod(Z0 = list(type = "SFO", to = "Z1", sink = FALSE),
Z2 = list(type = "SFO", to = "Z3"),
Z3 = list(type = "SFORB"))
m.Z.mkin.1 <- mkinfit(Z.mkin.1, FOCUS_2006_Z_mkin,
- parms.ini = c(k_Z0_Z1 = 0.5, k_Z1_Z2 = 0.3, k_Z2_Z3 = 0.2),
+ parms.ini = c(k_Z0_Z1 = 0.5, k_Z1_Z2 = 0.3),
quiet = TRUE)
plot(m.Z.mkin.1)
summary(m.Z.mkin.1, data = FALSE)
@@ -498,8 +498,8 @@ summary(m.Z.mkin.5, data = FALSE)
@
Looking at the confidence intervals of the SFORB model parameters of Z3, it is
-clear that nothing can be said about a degradation rate of Z3. However, this
-appears to be a feature of the data.
+clear that nothing can be said about the degradation rate of Z3 towards the end
+of the experiment. However, this appears to be a feature of the data.
<<FOCUS_2006_Z_residuals_11, fig=TRUE>>=
par(mfrow = c(2, 2))
diff --git a/vignettes/examples.pdf b/vignettes/examples.pdf
index 8d32159..bd01239 100644
--- a/vignettes/examples.pdf
+++ b/vignettes/examples.pdf
Binary files differ
diff --git a/vignettes/mkin.Rnw b/vignettes/mkin.Rnw
index 2f79cc5..22c9c15 100644
--- a/vignettes/mkin.Rnw
+++ b/vignettes/mkin.Rnw
@@ -149,9 +149,9 @@ SFO.fit <- mkinfit(SFO, FOCUS_2006_C)
summary(SFO.fit)
SFORB.fit <- mkinfit(SFORB, FOCUS_2006_C)
summary(SFORB.fit)
-SFO_SFO.fit <- mkinfit(SFO_SFO, FOCUS_2006_D, plot=TRUE)
+SFO_SFO.fit <- mkinfit(SFO_SFO, FOCUS_2006_D)
summary(SFO_SFO.fit, data=FALSE)
-SFORB_SFO.fit <- mkinfit(SFORB_SFO, FOCUS_2006_D, plot=TRUE)
+SFORB_SFO.fit <- mkinfit(SFORB_SFO, FOCUS_2006_D)
summary(SFORB_SFO.fit, data=FALSE)
@
diff --git a/vignettes/mkin.pdf b/vignettes/mkin.pdf
index 212feed..3eebf14 100644
--- a/vignettes/mkin.pdf
+++ b/vignettes/mkin.pdf
Binary files differ

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