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2019-07-08Start of adaption to mkin 0.9.49.5Johannes Ranke1-57/+57
2019-03-14Corrections in the gmkin manualJohannes Ranke1-57/+57
2018-03-01Static documentation rebuilt by current pkgdownJohannes Ranke1-353/+569
2017-10-13Install with drat, static documentation rebuilt by pkgdownJohannes Ranke1-32/+145
2016-04-23Acknowledge the contributions of Stefan MeineckeJohannes Ranke1-2/+2
He gave a lot of valuable feedback during the project 56703.
2016-01-25Remove pure markdown version of vignetteJohannes Ranke1-408/+0
2016-01-23Add three howtos to the manual serving as GUI test casesJohannes Ranke2-2/+165
2016-01-08Do not show fit option widgets when not fit is configuredv0.6.6Johannes Ranke1-1/+1
Also give a hint how to configure a fit.
2016-01-08Update the screenshot showing the keybord shortcut for savingJohannes Ranke1-0/+0
2016-01-08Fixed some bugs, thanks to Stefan Meinecke for reportingJohannes Ranke2-13/+14
2015-12-11Updated vignettev0.6.5Johannes Ranke1-2/+2
2015-12-09Fix sorting of tables in results viewJohannes Ranke1-2/+2
2015-11-28Some manual updates and fixes to the import of wide dataJohannes Ranke11-12/+12
2015-11-10Vignettes rebuilt by staticdocs::build_site() for static documentation on ↵Johannes Ranke2-1/+0
r-forge
2015-11-10Vignettes rebuilt by staticdocs::build_site() for static documentation on ↵Johannes Ranke1-34/+0
r-forge
2015-11-10Add results screenshot to manual and use this for the READMEJohannes Ranke3-7/+12
2015-11-09Updated the manualJohannes Ranke26-267/+288
2015-10-22A lot of working components of the new layoutJohannes Ranke3-2/+410
2015-05-08Release v0.5-9Johannes Ranke1-0/+0
2015-05-08Rebuilt the vignette some days agov0.5-9Johannes Ranke1-4/+13
2014-11-19Small fixes to the manualJohannes Ranke2-4/+4
2014-11-19Not sure why this is needed, but it should probably be in the repositoryJohannes Ranke1-0/+0
2014-10-22Save plots in different formatsJohannes Ranke4-6/+12
- Add possibility to save plots in different formats - Make it possible to exclude the legend from the plot - Update of the manual
2014-10-15Switch to using the Port algorithm per defaultJohannes Ranke1-4/+5
Actually this only changes the order of entries in the dropbox, the default is set in mkin::mkinfit().
2014-10-14Add a note about transforming fractionsJohannes Ranke2-2/+9
2014-10-14Fix a heading in the manual, release to r-forge repoJohannes Ranke2-4/+4
2014-10-11Fix generating and moving statidocsJohannes Ranke2-1/+1
2014-10-11Switch manual to rmarkdown to get a nice TOCJohannes Ranke3-522/+223
2014-10-10Added a manual, small GUI improvementsJohannes Ranke19-0/+972
2014-05-07Fork the gmkin GUI from mkin. See ChangeLog for detailsJohannes Ranke33-1660/+0
2014-05-05Another attempt to fix vignette building on windowsJohannes Ranke16-1/+1
2014-05-05Update of vignettesJohannes Ranke18-5/+23
2014-05-02Update of the FOCUS Z vignette, release candidateJohannes Ranke15-13/+44
2013-11-17Conflicts:jranke32-706/+1512
README.md TODO git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@163 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
2013-11-11Remove vignette PDFs to have them rebuilt on every buildjranke2-0/+0
git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@152 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
2013-11-06Update of the vignettesjranke5-6/+8
git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@140 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
2013-04-14- Update the TODO list, setting some requirements for version 1.0jranke4-5/+5
- Check that initial values specified using parms.ini are actually needed for the model, stop otherwise - List all formation fractions in the same place in the summary, also if they were fitted in the model - Include an FOMC model coupled to two metabolites in the unit tests - Some updates needed because of the above - Update of static documentation including the vignettes - Update of the mkin vignettes in the vignettes directory git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@82 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
2013-03-05Update of vignettes and static HTML documentationjranke2-0/+0
git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@75 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
2013-03-05- Calculate confidence intervals for parameters based on the t distributionjranke3-62/+79
Thanks to the CAKE developers at Tessella for the call to qt() - Calculate asymetric confidence intervals for backtransformed parameters - Overhaul and recompile vignettes git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@74 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
2013-02-18- Completion of the multicompartment part of the mkin examples vignettejranke5-51/+60
- Fix to chi2 error level calculation by correctly returning backtransformed parameters as bparms.optim and bparms.fixed - Adaptations of unit tests, summary and plot functions git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@67 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
2013-02-18- Some more work on the vignettejranke1-29/+46
- Don't plot a main title in mkinresplot git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@66 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
2013-02-18More work on the examples vignettejranke2-1/+189
git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@65 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
2013-02-17- Removed vignette files that are built during generationjranke22-25660/+0
- Updated the staticdoc documentation git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@63 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
2013-02-17- Added the examples vignette to the kinfit packagejranke1-3/+0
- Added calls to utils::globalVariables to make R CMD check pass cleanly without NOTES git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@62 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
2013-02-16- Some maintenance fixesjranke22-0/+2047
- Start of the examples vignette git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@61 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
2012-09-20Some updates of the mkin vignettejranke3-68/+88
Added the kinfit vignette file to the repository git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@57 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
2012-06-28Delete the PDF versions of the vignette to have them rebuilt on r-forge/CRANjranke1-0/+0
git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@46 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
2012-06-26- Created an html index instead of a php indexjranke1-0/+0
- Rebuilt the mkin documentation git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@44 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
2012-06-26Some stuff I did not check in yesterday for some reason.jranke1-0/+6
git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@43 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
2012-06-25- Document endpoints() functionjranke2-3/+3
- Fix unit tests that were broken by introduction of the endpoints function - Small documentation fixes - Format output of backtransformed parameters - Integrate snippet for making static documentation using staticdocs by Hadley Wickham git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@41 edb9625f-4e0d-4859-8d74-9fd3b1da38cb

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