diff options
| author | jranke <jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb> | 2010-03-30 19:49:44 +0000 |
|---|---|---|
| committer | jranke <jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb> | 2010-03-30 19:49:44 +0000 |
| commit | 12934520d7ec3218ce1505787b6066334a24a562 (patch) | |
| tree | e3d3439a63260dfe8fc01037ef297e09e876cc67 /tests | |
Initial import of the kinfit package developed from 2008-07 to 2010-03 at
Harlan Laboratories Ltd (former RCC Ltd).
Supports fitting of parent data with the usual FOCUS kinetic models.
git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/kinfit@2 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
Diffstat (limited to 'tests')
| -rw-r--r-- | tests/test_FOCUS_2006_A.R | 25 | ||||
| -rw-r--r-- | tests/test_FOCUS_2006_A.Rout.save | 79 |
2 files changed, 104 insertions, 0 deletions
diff --git a/tests/test_FOCUS_2006_A.R b/tests/test_FOCUS_2006_A.R new file mode 100644 index 0000000..2077315 --- /dev/null +++ b/tests/test_FOCUS_2006_A.R @@ -0,0 +1,25 @@ +library(kinfit)
+data(FOCUS_2006_A)
+fits <- kinfit(FOCUS_2006_A, kinmodels = c("SFO", "HS"))
+print(kinresults(fits)$results, digits=5)
+print(kinresults(fits)$stats, digits=5)
+
+data(FOCUS_2006_B)
+fits <- kinfit(FOCUS_2006_B, kinmodels = c("SFO", "FOMC", "DFOP"))
+print(kinresults(fits)$results, digits=5)
+print(kinresults(fits)$stats, digits=5)
+
+data(FOCUS_2006_C)
+fits <- kinfit(FOCUS_2006_C, kinmodels = c("SFO", "FOMC", "DFOP"))
+print(kinresults(fits)$results, digits=5)
+print(kinresults(fits)$stats, digits=5)
+
+data(FOCUS_2006_D)
+fits <- kinfit(FOCUS_2006_D, kinmodels = c("SFO", "FOMC"))
+print(kinresults(fits)$results, digits=5)
+print(kinresults(fits)$stats, digits=5)
+
+data(FOCUS_2006_E)
+fits <- kinfit(FOCUS_2006_E, kinmodels = c("SFO", "FOMC", "DFOP"))
+print(kinresults(fits)$results, digits=5)
+print(kinresults(fits)$stats, digits=5)
diff --git a/tests/test_FOCUS_2006_A.Rout.save b/tests/test_FOCUS_2006_A.Rout.save new file mode 100644 index 0000000..a26b701 --- /dev/null +++ b/tests/test_FOCUS_2006_A.Rout.save @@ -0,0 +1,79 @@ +
+R version 2.10.0 (2009-10-26)
+Copyright (C) 2009 The R Foundation for Statistical Computing
+ISBN 3-900051-07-0
+
+R is free software and comes with ABSOLUTELY NO WARRANTY.
+You are welcome to redistribute it under certain conditions.
+Type 'license()' or 'licence()' for distribution details.
+
+R is a collaborative project with many contributors.
+Type 'contributors()' for more information and
+'citation()' on how to cite R or R packages in publications.
+
+Type 'demo()' for some demos, 'help()' for on-line help, or
+'help.start()' for an HTML browser interface to help.
+Type 'q()' to quit R.
+
+> library(kinfit)
+> data(FOCUS_2006_A)
+> fits <- kinfit(FOCUS_2006_A, kinmodels = c("SFO", "HS"))
+> print(kinresults(fits)$results, digits=5)
+ DT50 DT90
+SFO 18.624 61.868
+HS 20.294 49.854
+> print(kinresults(fits)$stats, digits=5)
+ n.times df mean.means RSS err.min
+SFO 8 6 50.054 221.8078 0.083848
+HS 8 4 50.054 6.6927 0.016766
+>
+> data(FOCUS_2006_B)
+> fits <- kinfit(FOCUS_2006_B, kinmodels = c("SFO", "FOMC", "DFOP"))
+> print(kinresults(fits)$results, digits=5)
+ DT50 DT90
+SFO 8.8686 29.461
+FOMC 8.6834 30.754
+DFOP 8.6829 30.789
+> print(kinresults(fits)$stats, digits=5)
+ n.times df mean.means RSS err.min
+SFO 8 6 35.015 30.656 0.044555
+FOMC 8 5 35.015 28.583 0.045886
+DFOP 8 4 35.015 28.550 0.049527
+>
+> data(FOCUS_2006_C)
+> fits <- kinfit(FOCUS_2006_C, kinmodels = c("SFO", "FOMC", "DFOP"))
+> print(kinresults(fits)$results, digits=5)
+ DT50 DT90
+SFO 2.2647 7.5232
+FOMC 1.7852 15.1479
+DFOP 1.8869 21.2507
+> print(kinresults(fits)$stats, digits=5)
+ n.times df mean.means RSS err.min
+SFO 9 7 23.589 196.5334 0.158440
+FOMC 9 6 23.589 31.0509 0.066568
+DFOP 9 5 23.589 4.3627 0.026621
+>
+> data(FOCUS_2006_D)
+> fits <- kinfit(FOCUS_2006_D, kinmodels = c("SFO", "FOMC"))
+> print(kinresults(fits)$results, digits=5)
+ DT50 DT90
+SFO 7.0776 23.511
+FOMC 6.9350 24.044
+> print(kinresults(fits)$stats, digits=5)
+ n.times df mean.means RSS err.min
+SFO 9 7 39.523 207.63 0.064524
+FOMC 9 6 39.523 205.45 0.067802
+>
+> data(FOCUS_2006_E)
+> fits <- kinfit(FOCUS_2006_E, kinmodels = c("SFO", "FOMC", "DFOP"))
+> print(kinresults(fits)$results, digits=5)
+ DT50 DT90
+SFO 2.2647 7.5232
+FOMC 1.7852 15.1479
+DFOP 1.8869 21.2507
+> print(kinresults(fits)$stats, digits=5)
+ n.times df mean.means RSS err.min
+SFO 9 7 23.589 196.5334 0.158440
+FOMC 9 6 23.589 31.0509 0.066568
+DFOP 9 5 23.589 4.3627 0.026621
+>
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