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-rw-r--r--R/kinerrmin.R21
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diff --git a/R/kinerrmin.R b/R/kinerrmin.R
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+++ b/R/kinerrmin.R
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+kinerrmin <- function(kinfits, kinmodel = "SFO", alpha = 0.05)
+{
+ m = kinfits[[kinmodel]]
+
+ kindata <- data.frame(t = kinfits[[kinmodel]]$model$t,
+ parent = kinfits[[kinmodel]]$model$parent)
+ kindata.means <- aggregate(kindata, list(kindata$t), mean)
+ kindata.means.mean <- mean(kindata.means$parent, na.rm=TRUE)
+
+ n.parms = length(coef(m))
+ df = length(kindata.means$parent) - n.parms
+ kindata.means$est <- predict(m, kindata.means)
+
+ f <- function(err)
+ {
+ (sum((kindata.means$parent - kindata.means$est)^2/((err*kindata.means.mean)^2)) -
+ qchisq(1 - alpha,df))^2
+ }
+ err.min <- optimize(f, c(0.01,0.9))$minimum
+ return(err.min)
+}

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