diff options
| author | Johannes Ranke <jranke@uni-bremen.de> | 2021-06-09 16:53:31 +0200 |
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2021-06-09 17:00:41 +0200 |
| commit | c6eb6b2bb598002523c3d34d71b0e4a99671ccd6 (patch) | |
| tree | 7c13470ea01fca6c1cec3749b66a84a17154ec82 /DESCRIPTION | |
| parent | 9907f17aa98bddfe60e82a71c70a2fea914a02f7 (diff) | |
Rudimentary support for setting up nlmixr models
- All degradation models are specified as ODE models. This appears to be
fast enough
- Error models are being translated to nlmixr as close to the mkin error
model as possible. When using the 'saem' backend, it appears not to be
possible to use the same error model for more than one observed variable
- No support yet for models with parallel formation of metabolites, where
the ilr transformation is used in mkin per default
- There is a bug in nlmixr which appears to be triggered if the data are
not balanced, see nlmixrdevelopment/nlmixr#530
- There is a print and a plot method, the summary method is not finished
Diffstat (limited to 'DESCRIPTION')
| -rw-r--r-- | DESCRIPTION | 9 |
1 files changed, 4 insertions, 5 deletions
diff --git a/DESCRIPTION b/DESCRIPTION index 48aaf81f..5b90ef37 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,8 +1,8 @@ Package: mkin Type: Package Title: Kinetic Evaluation of Chemical Degradation Data -Version: 1.0.4.9000 -Date: 2021-04-21 +Version: 1.0.5 +Date: 2021-06-03 Authors@R: c( person("Johannes", "Ranke", role = c("aut", "cre", "cph"), email = "jranke@uni-bremen.de", @@ -18,11 +18,10 @@ Description: Calculation routines based on the FOCUS Kinetics Report (2006, note that no warranty is implied for correctness of results or fitness for a particular purpose. Depends: R (>= 2.15.1), parallel -Imports: stats, graphics, methods, deSolve, R6, inline (>= 0.3.17), numDeriv, - lmtest, pkgbuild, nlme (>= 3.1-151), purrr, saemix (>= 3.1.9000) +Imports: stats, graphics, methods, deSolve, R6, inline (>= 0.3.19), numDeriv, + lmtest, pkgbuild, nlme (>= 3.1-151), purrr, saemix, nlmixr Suggests: knitr, rbenchmark, tikzDevice, testthat, rmarkdown, covr, vdiffr, benchmarkme, tibble, stats4 -Remotes: github::saemixdevelopment/saemixextension License: GPL LazyLoad: yes LazyData: yes |