Remove nlmixr interface for release of mkin 1.1.0

I am postponing my attempts to get the nlmixr interface to CRAN, given
some problems with nlmixr using R-devel under Windows, see
https://github.com/nlmixrdevelopment/nlmixr/issues/596
and
https://github.com/r-hub/rhub/issues/512,
which is fixed by the removal of nlmixr from the testsuite.

For the tests to be more platform independent, the biphasic mixed
effects models test dataset was defined in a way that fitting
should be more robust (less ill-defined).

1 files changed, 0 insertions, 15 deletions

diff --git a/NAMESPACE b/NAMESPACE
index aa3899ac..c5a4a389 100644
--- a/NAMESPACE
+++ b/NAMESPACE
@@ -8,7 +8,6 @@ S3method(aw,mmkin)
 S3method(confint,mkinfit)
 S3method(f_time_norm_focus,mkindsg)
 S3method(f_time_norm_focus,numeric)
-S3method(intervals,nlmixr.mmkin)
 S3method(intervals,saem.mmkin)
 S3method(loftest,mkinfit)
 S3method(logLik,mkinfit)
@@ -18,7 +17,6 @@ S3method(mixed,mmkin)
 S3method(mkinpredict,mkinfit)
 S3method(mkinpredict,mkinmod)
 S3method(nlme,mmkin)
-S3method(nlmixr,mmkin)
 S3method(nobs,mkinfit)
 S3method(parms,mkinfit)
 S3method(parms,mmkin)
@@ -33,17 +31,14 @@ S3method(print,mkinmod)
 S3method(print,mmkin)
 S3method(print,nafta)
 S3method(print,nlme.mmkin)
-S3method(print,nlmixr.mmkin)
 S3method(print,saem.mmkin)
 S3method(print,summary.mkinfit)
 S3method(print,summary.nlme.mmkin)
-S3method(print,summary.nlmixr.mmkin)
 S3method(print,summary.saem.mmkin)
 S3method(residuals,mkinfit)
 S3method(saem,mmkin)
 S3method(summary,mkinfit)
 S3method(summary,nlme.mmkin)
-S3method(summary,nlmixr.mmkin)
 S3method(summary,saem.mmkin)
 S3method(update,mkinfit)
 S3method(update,mmkin)
@@ -65,7 +60,6 @@ export(get_deg_func)
 export(ilr)
 export(intervals)
 export(invilr)
-export(invtffm0)
 export(loftest)
 export(logistic.solution)
 export(lrtest)
@@ -94,9 +88,6 @@ export(nafta)
 export(nlme)
 export(nlme_data)
 export(nlme_function)
-export(nlmixr)
-export(nlmixr_data)
-export(nlmixr_model)
 export(parms)
 export(plot_err)
 export(plot_res)
@@ -105,19 +96,15 @@ export(saem)
 export(saemix_data)
 export(saemix_model)
 export(sigma_twocomp)
-export(tffm0)
 export(transform_odeparms)
 import(deSolve)
 import(graphics)
 import(nlme)
 importFrom(R6,R6Class)
-importFrom(dplyr,"%>%")
 importFrom(grDevices,dev.cur)
 importFrom(lmtest,lrtest)
 importFrom(methods,signature)
 importFrom(nlme,intervals)
-importFrom(nlmixr,nlmixr)
-importFrom(nlmixr,tableControl)
 importFrom(parallel,detectCores)
 importFrom(parallel,mclapply)
 importFrom(parallel,parLapply)
@@ -128,7 +115,6 @@ importFrom(stats,aggregate)
 importFrom(stats,as.formula)
 importFrom(stats,coef)
 importFrom(stats,coefficients)
-importFrom(stats,confint)
 importFrom(stats,cov2cor)
 importFrom(stats,dist)
 importFrom(stats,dnorm)
@@ -148,7 +134,6 @@ importFrom(stats,qnorm)
 importFrom(stats,qt)
 importFrom(stats,residuals)
 importFrom(stats,rnorm)
-importFrom(stats,sd)
 importFrom(stats,shapiro.test)
 importFrom(stats,update)
 importFrom(stats,vcov)