diff options
| author | Johannes Ranke <jranke@uni-bremen.de> | 2019-05-02 13:17:05 +0200 |
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2019-05-02 13:17:05 +0200 |
| commit | 70591022c07f0e8fb4dd67789b7c8d78af8ebc18 (patch) | |
| tree | acaecfce5ae304cfc48b111c6db24a3f2ed5c83d /docs/articles/FOCUS_D.html | |
| parent | 380a29e81f88cd80c9c6915200ddc7054c8a085a (diff) | |
Better initials for error model parameters
- Also make it possible to specify initial values for error model
parameters.
- Run tests
- Rebuild docs
Diffstat (limited to 'docs/articles/FOCUS_D.html')
| -rw-r--r-- | docs/articles/FOCUS_D.html | 14 |
1 files changed, 7 insertions, 7 deletions
diff --git a/docs/articles/FOCUS_D.html b/docs/articles/FOCUS_D.html index e63feb07..0ae6a391 100644 --- a/docs/articles/FOCUS_D.html +++ b/docs/articles/FOCUS_D.html @@ -88,7 +88,7 @@ <h1>Example evaluation of FOCUS Example Dataset D</h1> <h4 class="author">Johannes Ranke</h4> - <h4 class="date">2019-04-10</h4> + <h4 class="date">2019-05-02</h4> <div class="hidden name"><code>FOCUS_D.Rmd</code></div> @@ -167,9 +167,9 @@ <p>A comprehensive report of the results is obtained using the <code>summary</code> method for <code>mkinfit</code> objects.</p> <div class="sourceCode" id="cb11"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb11-1" title="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(fit)</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.49.4 -## R version used for fitting: 3.5.3 -## Date of fit: Wed Apr 10 10:11:31 2019 -## Date of summary: Wed Apr 10 10:11:31 2019 +## R version used for fitting: 3.6.0 +## Date of fit: Thu May 2 12:40:29 2019 +## Date of summary: Thu May 2 12:40:29 2019 ## ## Equations: ## d_parent/dt = - k_parent_sink * parent - k_parent_m1 * parent @@ -177,10 +177,10 @@ ## ## Model predictions using solution type deSolve ## -## Fitted with method using 396 model solutions performed in 1.048 s +## Fitted using 396 model solutions performed in 1.048 s ## ## Error model: -## NULL +## Constant variance ## ## Starting values for parameters to be optimised: ## value type @@ -235,7 +235,7 @@ ## k_m1_sink 0.005261 7.510 6.165e-09 0.004012 6.898e-03 ## sigma 3.126000 8.718 2.235e-10 2.396000 3.855e+00 ## -## Chi2 error levels in percent: +## FOCUS Chi2 error levels in percent: ## err.min n.optim df ## All data 6.398 4 15 ## parent 6.827 3 6 |